RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 DHRS4L2Q6PKH6 230 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 C6orf89Q6UWU4 347 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 DLEU7Q6UYE1 221 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 WDR88Q6ZMY6 472 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF813Q6ZN06 617 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 MSANTD1Q6ZTZ1 278 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 NET1Q7Z628 596 aaPredicted RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ARMC8Q8IUR7 673 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 SKA3Q8IX90 412 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 C20orf196Q8IYI0 205 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 TMEM123Q8N131 208 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 LSMEM1Q8N8F7 131 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 NUP37Q8NFH4 326 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 OR4D11Q8NGI4 311 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 OR6N1Q8NGY5 312 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 VANGL1Q8TAA9 524 aaPredicted RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 BBS10Q8TAM1 723 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 DNAJA4Q8WW22 397 aaPredicted RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 CKAP2Q8WWK9 683 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 CFHR4Q92496 578 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC47A1Q96FL8 570 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC41A3Q96GZ6 507 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF75AQ96N20 296 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 MCHR1Q99705 422 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 C19orf24Q9BVV8 132 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 MRPL37Q9BZE1 423 aaKnown RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 OR51B6Q9H340 312 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 RAD21L1Q9H4I0 556 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 LPAR2Q9HBW0 351 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 DYNLRB1Q9NP97 96 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 TMEM160Q9NX00 188 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 THUMPD1Q9NXG2 353 aaKnown RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 TAS2R5Q9NYW4 299 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF224Q9NZL3 707 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 MYEF2Q9P2K5 600 aaKnown RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 RCE1Q9Y256 329 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 POFUT2Q9Y2G5 429 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 CMAHPQ9Y471 501 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 FKBP7Q9Y680 259 aa4.03□□□□□ -1.76
GTF3C3-208ENST00000455546 TRBV5-3A0A0A0MS03 114 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 LOC102725191A0A1B0GVB3 256 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 CPSF4LA6NMK7 179 aaKnown RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 EVPLLA8MZ36 301 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 KPNA4O00629 521 aaPredicted RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 POLR3GO15318 223 aaPredicted RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 CDC14BO60729 498 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 SHOX2O60902 331 aaPredicted RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 SERPINB7O75635 380 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 TUSC2O75896 110 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 PDE5AO76074 875 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 LYPD3O95274 346 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 CLPTM1O96005 669 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 TACSTD2P09758 323 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 GYPEP15421 78 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF14P17017 642 aaPredicted RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 PAX7P23759 505 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 GIFP27352 417 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 CFPP27918 469 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 RBMXP38159 391 aaKnown RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 PPOXP50336 477 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 SH3BGRP55822 239 aaPredicted RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 MTPNP58546 118 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ERVS71-1P61550 626 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 NCALDP61601 193 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 MYBPC1Q00872 1141 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 PUDPQ08623 228 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 SF3A3Q12874 501 aaKnown RBP eCLIP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 HNRNPA0Q13151 305 aaKnown RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 RIN1Q13671 783 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 MELKQ14680 651 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 NPTX1Q15818 432 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 GSG1Q2KHT4 349 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 TRMT5Q32P41 509 aaKnown RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 C19orf54Q5BKX5 351 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 TTMPQ5BVD1 217 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ENTPD8Q5MY95 495 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ELFN2Q5R3F8 820 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 C1QTNF12Q5T7M4 302 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 GKAP1Q5VSY0 366 aaPredicted RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 FAM91A1Q658Y4 838 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 KRT73Q86Y46 540 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 PTOV1Q86YD1 416 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF584Q8IVC4 421 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF786Q8N393 782 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 LRRC18Q8N456 261 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 PAQR4Q8N4S7 273 aaPredicted RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF540Q8NDQ6 660 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 BHLHE22Q8NFJ8 381 aaPredicted RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 GPR32P1Q8NGA4 272 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 OR6T1Q8NGN1 323 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 LRRC8CQ8TDW0 803 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 NEU4Q8WWR8 484 aaPredicted RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 YIPF5Q969M3 257 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC35B4Q969S0 331 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 MRPL24Q96A35 216 aaKnown RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 LRR1Q96L50 414 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 C7orf26Q96N11 449 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ANKRD27Q96NW4 1050 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF317Q96PQ6 595 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms