RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 UCP2P55851 309 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 SLC25A3Q00325 362 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 TEKQ02763 1124 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 SCRN3Q0VDG4 424 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 TSPAN31Q12999 210 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 MST1LQ2TV78 715 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 PCGF3Q3KNV8 242 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 SLC36A3Q495N2 470 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 IQCCQ4KMZ1 466 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 ZMAT1Q5H9K5 638 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 PHYHD1Q5SRE7 291 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 CARD17Q5XLA6 110 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 LCN8Q6JVE9 175 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 CLEC2AQ6UVW9 174 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 CD300LDQ6UXZ3 194 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 RHOUQ7L0Q8 258 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 MDP1Q86V88 176 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 ZDHHC21Q8IVQ6 265 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 RBM15BQ8NDT2 890 aaKnown RBP5.54□□□□□ -1.52
USP54-202ENST00000413442 CPEB3Q8NE35 698 aaKnown RBP5.54□□□□□ -1.52
USP54-202ENST00000413442 WFDC11Q8NEX6 87 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 OR4K5Q8NGD3 323 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 OR51A7Q8NH64 312 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 PFN4Q8NHR9 129 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 NMD3Q96D46 503 aaKnown RBP5.54□□□□□ -1.52
USP54-202ENST00000413442 ZNF837Q96EG3 531 aaPredicted RBP5.54□□□□□ -1.52
USP54-202ENST00000413442 PERPQ96FX8 193 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 Q96MF0 132 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 DCLRE1CQ96SD1 692 aaKnown RBP5.54□□□□□ -1.52
USP54-202ENST00000413442 DOK1Q99704 481 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 FUZQ9BT04 418 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 CACNG6Q9BXT2 260 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 CYSLTR2Q9NS75 346 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 IL20Q9NYY1 176 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 VSX1Q9NZR4 365 aaPredicted RBP5.54□□□□□ -1.52
USP54-202ENST00000413442 KCNG2Q9UJ96 466 aa5.54□□□□□ -1.52
USP54-202ENST00000413442 ALPK2Q86TB3 2170 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 TEX13CA0A0J9YWL9 993 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 A0A1W2PR80 420 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 PRSS37A4D1T9 235 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 ARRDC5A6NEK1 342 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 UNC119BA6NIH7 251 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 ATP6V1G2-DDX39BF2Z307 99 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 GYG2O15488 501 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 KHDRBS3O75525 346 aaKnown RBP5.53□□□□□ -1.52
USP54-202ENST00000413442 SERPINI2O75830 405 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 RENP00797 406 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 HLA-HP01893 362 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 TP53P04637 393 aaPredicted RBP5.53□□□□□ -1.52
USP54-202ENST00000413442 MMP7P09237 267 aaPredicted RBP5.53□□□□□ -1.52
USP54-202ENST00000413442 OR4A8P0C604 315 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 T-ENOLP0DO92 83 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 RAP2AP10114 183 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 B4GALT1P15291 398 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 NCK1P16333 377 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 TCN1P20061 433 aaPredicted RBP5.53□□□□□ -1.52
USP54-202ENST00000413442 MAKP20794 623 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 MSR1P21757 451 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 GIFP27352 417 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 LAP3P28838 519 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 YAP1P46937 504 aaKnown RBP5.53□□□□□ -1.52
USP54-202ENST00000413442 LIMS1P48059 325 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 GIPRP48546 466 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 GSSP48637 474 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 PDLIM4P50479 330 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 GYS2P54840 703 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 TMEM33P57088 247 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 HSF2Q03933 536 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 HGFACQ04756 655 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 GLO1Q04760 184 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 LOXL1Q08397 574 aaPredicted RBP5.53□□□□□ -1.52
USP54-202ENST00000413442 CD47Q08722 323 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 ECH1Q13011 328 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 FHL1Q13642 323 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 ADIPOQQ15848 244 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 ZNF718Q3SXZ3 478 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 FGD3Q5JSP0 725 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 FAM122BQ7Z309 247 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 TSEN54Q7Z6J9 526 aaKnown RBP5.53□□□□□ -1.52
USP54-202ENST00000413442 KRTAP1-3Q8IUG1 177 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 GLB1L2Q8IW92 636 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 ZNF786Q8N393 782 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 NPEPL1Q8NDH3 523 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 SLC30A7Q8NEW0 376 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 GJC3Q8NFK1 279 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 OR52L1Q8NGH7 329 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 OR5L1Q8NGL2 311 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 MOSPD2Q8NHP6 518 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 DNAJC9Q8WXX5 260 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 FAM168AQ92567 244 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 HDAC2Q92769 488 aaKnown RBP5.53□□□□□ -1.52
USP54-202ENST00000413442 HPS1Q92902 700 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 MRPL24Q96A35 216 aaKnown RBP5.53□□□□□ -1.52
USP54-202ENST00000413442 NRBF2Q96F24 287 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 ZNF570Q96NI8 536 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 BTBD10Q9BSF8 475 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 TEX12Q9BXU0 123 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 REG4Q9BYZ8 158 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 CDH20Q9HBT6 801 aa5.53□□□□□ -1.52
USP54-202ENST00000413442 NOX3Q9HBY0 568 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms