RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 RPL36Q9Y3U8 105 aaKnown RBP-1.09□□□□□ -2.58
MIR548A3-201ENST00000385297 SNX5Q9Y5X3 404 aa-1.09□□□□□ -2.58
MIR548A3-201ENST00000385297 NF1P21359 2839 aa-1.09□□□□□ -2.58
MIR548A3-201ENST00000385297 CREBBPQ92793 2442 aa-1.09□□□□□ -2.58
MIR548A3-201ENST00000385297 TNRC6AQ8NDV7 1962 aaKnown RBP-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 TENM2Q9NT68 2774 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 MYBPHLA2RUH7 354 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 G3V3Q6 166 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 CLDN34H7C241 214 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 ZNF208O43345 1280 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 SH3BP5O60239 455 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 ZNF189O75820 626 aaPredicted RBP-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 RAB3DO95716 219 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 IFNAR1P17181 557 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 POLR2EP19388 210 aaKnown RBP-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 PCMT1P22061 227 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 PAX7P23759 505 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 TMED10P49755 219 aaKnown RBP-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 CCNA1P78396 465 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 SIM2Q14190 667 aaPredicted RBP-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 AARDQ4LEZ3 155 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 AVPI1Q5T686 147 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 CNIH2Q6PI25 160 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 DEGS2Q6QHC5 323 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 PET117Q6UWS5 81 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 DLEU7Q6UYE1 221 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 TMEM17Q86X19 198 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 B3GNT7Q8NFL0 401 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 OR5L2Q8NGL0 311 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 SLC2A14Q8TDB8 520 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 SDR42E1Q8WUS8 393 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 OR5P3Q8WZ94 311 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 AIPL1Q9NZN9 384 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 NDUFA13Q9P0J0 144 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 IKZF2Q9UKS7 526 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 KIAA1257Q9ULG3 409 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 SOX21Q9Y651 276 aaPredicted RBP-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 PIEZO1Q92508 2521 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 KIAA2026Q5HYC2 2103 aa-1.1□□□□□ -2.59
MIR548A3-201ENST00000385297 DOPEY1Q5JWR5 2465 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 TRAV39A0A0B4J263 110 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 H3BRN7 92 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 RS1O15537 224 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 CA1P00915 261 aaPredicted RBP-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 IGHV3-11P01762 117 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 AK4P27144 223 aaPredicted RBP-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 DDOSTP39656 456 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 MAGEA8P43361 318 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 GPR6P46095 362 aaPredicted RBP-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 NPBWR2P48146 333 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 TPMTP51580 245 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 CCNG1P51959 295 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 TSTA3Q13630 321 aaPredicted RBP-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 LGALSLQ3ZCW2 172 aaPredicted RBP-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 CCDC92Q53HC0 331 aaPredicted RBP-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 YIF1BQ5BJH7 314 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 PLET1Q6UQ28 207 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 TEX43Q6ZNM6 134 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 TMEM179Q6ZVK1 233 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 ZNF767PQ75MW2 155 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 EIF4E3Q8N5X7 224 aaKnown RBP-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 ZNF713Q8N859 430 aaPredicted RBP-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 ATP6V0D2Q8N8Y2 350 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 OR5AU1Q8NGC0 362 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 NANPQ8TBE9 248 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 HIGD2AQ9BW72 106 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 GBA3Q9H227 469 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 CYP39A1Q9NYL5 469 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 PLAC8Q9NZF1 115 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 CNIH4Q9P003 139 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 HMGXB4Q9UGU5 601 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 LIPT1Q9Y234 373 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 MRPS18BQ9Y676 258 aaKnown RBP-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 U3KQK5 164 aa-1.11□□□□□ -2.59
MIR548A3-201ENST00000385297 KMT2AQ03164 3969 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 ARFGEF3Q5TH69 2177 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 TRGV2A0A075B6R0 118 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 IGKV1-6A0A0C4DH72 117 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 CCDC182A6NF36 153 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 H0Y626 953 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 PALMO75781 387 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 IGHMP01871 453 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 OPN1MWP04001 364 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 GPX1P07203 203 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 OPN1MW2P0DN77 364 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 OPN1MW3P0DN78 364 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 GZMBP10144 247 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 HRH1P35367 487 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 CYLC1P35663 651 aaPredicted RBP-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 SUB1P53999 127 aaKnown RBP eCLIP-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 PKNOX1P55347 436 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 ERVK-25P63136 954 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 CDK5Q00535 292 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 TCP10Q12799 353 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 MFSD4BQ5TF39 518 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 OR52E8Q6IFG1 317 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 H3F3CQ6NXT2 135 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 PGAP1Q75T13 922 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 KCTD9Q7L273 389 aa-1.12□□□□□ -2.59
MIR548A3-201ENST00000385297 PEX26Q7Z412 305 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms