RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 CA10Q9NS85 328 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 ZNF224Q9NZL3 707 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 POMPQ9Y244 141 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 USF3Q68DE3 2245 aa16.08■□□□□ 0.16
CHTOP-202ENST00000368687 IGHV2OR16-5A0A0B4J2B6 119 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 ZNF503-AS2A6NEH8 195 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 ARRDC5A6NEK1 342 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 ARPC3O15145 178 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 CST1P01037 141 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 ZNF26P17031 533 aaPredicted RBP16.07■□□□□ 0.16
CHTOP-202ENST00000368687 PCBD1P61457 104 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 RPS23P62266 143 aaKnown RBP16.07■□□□□ 0.16
CHTOP-202ENST00000368687 PIGFQ07326 219 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 FAM27BQ5VT28 67 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 DNM1P34Q6PK57 102 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 ZNF620Q6ZNG0 422 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 FOXL2NBQ6ZUU3 175 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 SPATA24Q86W54 205 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 ADGRG5Q8IZF4 528 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 OR4C15Q8NGM1 316 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 PERPQ96FX8 193 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 Q96M85 177 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 SNX18Q96RF0 628 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 CADM1Q9BY67 442 aaKnown RBP16.07■□□□□ 0.16
CHTOP-202ENST00000368687 LRMDAQ9H2I8 198 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 RNF121Q9H920 327 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 CCNB1IP1Q9NPC3 277 aa16.07■□□□□ 0.16
CHTOP-202ENST00000368687 TEX13CA0A0J9YWL9 993 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 IQCMA0A1B0GVH7 501 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 SLC22A23A1A5C7 686 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 MSR1P21757 451 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 NOS3P29474 1203 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 CRABP1P29762 137 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 ATP5J2P56134 94 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 ADAM8P78325 824 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 GALK2Q01415 458 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 FMODQ06828 376 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 MICAQ29983 383 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 MESTQ5EB52 335 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 Q5PR19 223 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 B3GLCTQ6Y288 498 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 SYT9Q86SS6 491 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 JAZF1Q86VZ6 243 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 CLDN22Q8N7P3 220 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 OR1J2Q8NGS2 313 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 CANT1Q8WVQ1 401 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 NSMAFQ92636 917 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 ZNF75AQ96N20 296 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 GPA33Q99795 319 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 SH3GL3Q99963 347 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 VSX1Q9NZR4 365 aaPredicted RBP16.06■□□□□ 0.16
CHTOP-202ENST00000368687 SLC7A8Q9UHI5 535 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 UGT2A1Q9Y4X1 527 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 IER3IP1Q9Y5U9 82 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 CDH10Q9Y6N8 788 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 PMF1-BGLAPU3KQ54 211 aa16.06■□□□□ 0.16
CHTOP-202ENST00000368687 ZNF469Q96JG9 3925 aaPredicted RBP16.06■□□□□ 0.16
CHTOP-202ENST00000368687 FLNAP21333 2647 aaKnown RBP16.05■□□□□ 0.16
CHTOP-202ENST00000368687 TCRBV3S1A0A5B6 114 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 GNGT2O14610 69 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 CELA3BP08861 270 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 CST2P09228 141 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 SERPINF1P36955 418 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 FXYD6P3P58550 94 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 SNRPD2P62316 118 aaKnown RBP16.05■□□□□ 0.16
CHTOP-202ENST00000368687 HSF2Q03933 536 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 TBC1D28Q2M2D7 210 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 ZNF770Q6IQ21 691 aaPredicted RBP16.05■□□□□ 0.16
CHTOP-202ENST00000368687 UNQ6126/PRO20091Q6UXV3 157 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 THSD4Q6ZMP0 1018 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 AQP11Q8NBQ7 271 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 NABP1Q96AH0 204 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 IFT27Q9BW83 186 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 DGCR6LQ9BY27 220 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 SEC61A2Q9H9S3 476 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 NOX3Q9HBY0 568 aa16.05■□□□□ 0.16
CHTOP-202ENST00000368687 MED13LQ71F56 2210 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 C12orf71A8MTZ7 269 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 B9A039 149 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 H7C417 338 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 SNAP29O95721 258 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 RENP00797 406 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 CD8AP01732 235 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 ZNF35P13682 527 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 NR4A1P22736 598 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 CALCRP30988 508 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 ARHGDIAP52565 204 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 COX10Q12887 443 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 DAG1Q14118 895 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 EFNB3Q15768 340 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 SGCAQ16586 387 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 C11orf71Q6IPW1 123 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 RASSF6Q6ZTQ3 369 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 YTHDF3Q7Z739 585 aaKnown RBP16.04■□□□□ 0.16
CHTOP-202ENST00000368687 ALDH16A1Q8IZ83 802 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 LRRC18Q8N456 261 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 SLC30A7Q8NEW0 376 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 OR9Q2Q8NGE9 314 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 RASD2Q96D21 266 aa16.04■□□□□ 0.16
CHTOP-202ENST00000368687 ERMAPQ96PL5 475 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms