RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SPG11Q96JI7 2443 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 OR6C74A6NCV1 312 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 TLCD2A6NGC4 264 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 GPR89AB7ZAQ6 455 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 BTN3A3O00478 584 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 PPIHO43447 177 aaKnown RBP4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 VENTXO95231 258 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 IGFBP1P08833 259 aaPredicted RBP4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 GPR89BP0CG08 455 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 GZMAP12544 262 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 IDSP22304 550 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 CCNCP24863 283 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 VEGFCP49767 419 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 NCF4Q15080 339 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZNF658BQ4V348 819 aaPredicted RBP4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 IGFL2Q6UWQ7 119 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 CES3Q6UWW8 571 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 CEACAM19Q7Z692 300 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 HPS6Q86YV9 775 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZDHHC21Q8IVQ6 265 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 IQCKQ8N0W5 287 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 ST6GALNAC3Q8NDV1 305 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 RAPGEF5Q92565 580 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 FAF2Q96CS3 445 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 CXorf40BQ96DE9 158 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 ERP44Q9BS26 406 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZSCAN5AQ9BUG6 496 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 COMMD4Q9H0A8 199 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 HAUS4Q9H6D7 363 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 FAM60AQ9NP50 221 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 IMP3Q9NV31 184 aaKnown RBP4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 ARMCX1Q9P291 453 aa4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 EIF3LQ9Y262 564 aaKnown RBP4.37□□□□□ -1.71
RNU4-39P-201ENST00000362455 NAV3Q8IVL0 2385 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 OR2AG2A6NM03 316 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 ALOX12BO75342 701 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 KLK3P07288 261 aaPredicted RBP4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 STSP08842 583 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 CLUP10909 449 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 IGFBP5P24593 272 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 PRDX3P30048 256 aaKnown RBP4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 OTX2P32243 289 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 CCDC183Q5T5S1 534 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 GPRC6AQ5T6X5 926 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 PDPK2PQ6A1A2 396 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 TMEM220Q6QAJ8 160 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 KDELC1Q6UW63 502 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 TRAPPC5Q8IUR0 188 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 BBS5Q8N3I7 341 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 CATSPER1Q8NEC5 780 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 OR4E2Q8NGC2 313 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 SPATA3Q8NHX4 192 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 ITLN2Q8WWU7 325 aaPredicted RBP4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 IMP4Q96G21 291 aaKnown RBP4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 AKR1E2Q96JD6 320 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 ATOH8Q96SQ7 321 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 KIR3DX1Q9H7L2 352 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 MEPEQ9NQ76 525 aaPredicted RBP4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 AIPL1Q9NZN9 384 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 DHRS4-AS1Q9P1J3 65 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 MAP1AP78559 2803 aaPredicted RBP4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 FER1L5A0AVI2 2057 aa4.36□□□□□ -1.71
RNU4-39P-201ENST00000362455 ANKRD36A6QL64 1941 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 CROCCQ5TZA2 2017 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 LOC285095A0A1B0GVY8 99 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 FAM74A7A6NL05 159 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 C19orf84I3L1E1 186 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 SH3BGRLO75368 114 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 SDC1P18827 310 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 ATP6V1C1P21283 382 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 PAX7P23759 505 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 ELK3P41970 407 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 EMDP50402 254 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 TDGF1P3P51864 188 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 PLOD1Q02809 727 aaPredicted RBP4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 PPIDQ08752 370 aaKnown RBP4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 PIGHQ14442 188 aaPredicted RBP4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 LTB4RQ15722 352 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 CHI3L2Q15782 390 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 PPP1R3AQ16821 1122 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 KRTAP21-3Q3LHN1 58 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 FAM74A3Q4VXF1 159 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 CCDC122Q5T0U0 273 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 MLIPQ5VWP3 458 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 FAM151BQ6UXP7 276 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 LANCL3Q6ZV70 420 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 DPY19L4Q7Z388 723 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 FGFRL1Q8N441 504 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 POM121L12Q8N7R1 296 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 NANPQ8TBE9 248 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 DTX3LQ8TDB6 740 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 OSTF1Q92882 214 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 TOMM40LQ969M1 308 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 C9orf85Q96MD7 179 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 NAP1L5Q96NT1 182 aaPredicted RBP4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 OLFM3Q96PB7 478 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 RNF157Q96PX1 679 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 TXN2Q99757 166 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 TMEM121Q9BTD3 319 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 ILKAPQ9H0C8 392 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms