RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 MS4A18H0YCH9 400 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 M0QX08 132 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 PIN1P1O15428 100 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 HOXA3O43365 443 aaPredicted RBP13.4□□□□□ -0.26
DDX55-202ENST00000354291 FMO6PO60774 539 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 PRB2P02812 416 aaPredicted RBP13.4□□□□□ -0.26
DDX55-202ENST00000354291 LCKP06239 509 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 PATE4P0C8F1 98 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 IGHV4-38-2P0DP08 117 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 B4GALT1P15291 398 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 MAKP20794 623 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 CBLP22681 906 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 PCBP3P57721 371 aaKnown RBP13.4□□□□□ -0.26
DDX55-202ENST00000354291 GLO1Q04760 184 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 TAF9Q16594 264 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 MS4A18Q3C1V0 323 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 PTOV1Q86YD1 416 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 SMYD1Q8NB12 490 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 ICA1LQ8NDH6 482 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 C11orf40Q8WZ69 217 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 ELMOD3Q96FG2 381 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 THOC1Q96FV9 657 aaKnown RBP13.4□□□□□ -0.26
DDX55-202ENST00000354291 LRR1Q96L50 414 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 TMEM43Q9BTV4 400 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 NPHS2Q9NP85 383 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 CLPSL1A2RUU4 121 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 SLC22A31A6NKX4 558 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 TPST2O60704 377 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 EDF1O60869 148 aaKnown RBP13.39□□□□□ -0.27
DDX55-202ENST00000354291 TSPAN15O95858 294 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 BGLAPP02818 100 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 SBK2P0C263 348 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 DRD4P21917 467 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 CDH12P55289 794 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 ERVS71-1P61550 626 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 PMS2P3Q13401 168 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 CAMK2DQ13557 499 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 NFYCQ13952 458 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 DUSP7Q16829 419 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 ZNF613Q6PF04 617 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 Q6ZPA2 131 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 TMEM123Q8N131 208 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 C10orf53Q8N6V4 93 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 ZDHHC16Q969W1 377 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 MCHR1Q99705 422 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 WFDC6Q9BQY6 131 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 EMC6Q9BV81 110 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 MRPL39Q9NYK5 338 aaKnown RBP13.39□□□□□ -0.27
DDX55-202ENST00000354291 ZNF224Q9NZL3 707 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 INSIG2Q9Y5U4 225 aa13.39□□□□□ -0.27
DDX55-202ENST00000354291 A0A0G2JND7 137 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 SPRY3O43610 288 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 MT-ATP6P00846 226 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 NGFP01138 241 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 IGHMP01871 453 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 MT-ND5P03915 603 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 SERPINA5P05154 406 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 OR8G3PP0DMU2 310 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 CCL2P13500 99 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 ZNF250P15622 560 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 SELEP16581 610 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 ZNF12P17014 697 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 MTPNP58546 118 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 RELBQ01201 579 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 PUDPQ08623 228 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 HLXQ14774 488 aaPredicted RBP13.38□□□□□ -0.27
DDX55-202ENST00000354291 INTS11Q5TA45 600 aaKnown RBP13.38□□□□□ -0.27
DDX55-202ENST00000354291 FIP1L1Q6UN15 594 aaKnown RBP13.38□□□□□ -0.27
DDX55-202ENST00000354291 LINC00114Q6XXX2 140 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 PXKQ7Z7A4 578 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 PATL1Q86TB9 770 aaKnown RBP13.38□□□□□ -0.27
DDX55-202ENST00000354291 SNX32Q86XE0 403 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 C20orf196Q8IYI0 205 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 SLC26A7Q8TE54 656 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 DCLRE1CQ96SD1 692 aaKnown RBP13.38□□□□□ -0.27
DDX55-202ENST00000354291 ARHGDIGQ99819 225 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 DENND2DQ9H6A0 471 aaPredicted RBP13.38□□□□□ -0.27
DDX55-202ENST00000354291 KAT8Q9H7Z6 458 aaKnown RBP13.38□□□□□ -0.27
DDX55-202ENST00000354291 B3GAT2Q9NPZ5 323 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 MRGBPQ9NV56 204 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 C1RLQ9NZP8 487 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 EGFL7Q9UHF1 273 aa13.38□□□□□ -0.27
DDX55-202ENST00000354291 IGLV3-9A0A075B6K5 115 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 ZNF726A6NNF4 738 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 M0R3H8 397 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 PLPP3O14495 311 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 CHP2O43745 196 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 UBL3O95164 117 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 HPRP00739 348 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 VIMP08670 466 aaKnown RBP13.37□□□□□ -0.27
DDX55-202ENST00000354291 HLA-DOBP13765 273 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 H2AFXP16104 143 aaPredicted RBP13.37□□□□□ -0.27
DDX55-202ENST00000354291 AHCYP23526 432 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 ZNF81P51508 661 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 SLC3A1Q07837 685 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 HNRNPA0Q13151 305 aaKnown RBP13.37□□□□□ -0.27
DDX55-202ENST00000354291 SELPLGQ14242 412 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 MOGQ16653 247 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 ZNF584Q8IVC4 421 aa13.37□□□□□ -0.27
DDX55-202ENST00000354291 PARP8Q8N3A8 854 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms