RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 IL6RP08887 468 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 TNFRSF1BP20333 461 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 BRS3P32247 399 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 CASRP41180 1078 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 PTTG1IPP53801 180 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 KLF3P57682 345 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ACSM2AQ08AH3 577 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ENPP2Q13822 863 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 UBE2V2Q15819 145 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 CSRP2Q16527 193 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ATP6V1FQ16864 119 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF674Q2M3X9 581 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ACSM2BQ68CK6 577 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 EIF5AL1Q6IS14 154 aaKnown RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 FBXO42Q6P3S6 717 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 WDR73Q6P4I2 378 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 DRAM2Q6UX65 266 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 UNQ6126/PRO20091Q6UXV3 157 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 LINGO4Q6UY18 593 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 CACUL1Q86Y37 369 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 BEST3Q8N1M1 668 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 RNASEH2CQ8TDP1 164 aaKnown RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 NTNG2Q96CW9 530 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 SLC41A3Q96GZ6 507 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 KIRREL1Q96J84 757 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 VPS25Q9BRG1 176 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 C20orf24Q9BUV8 137 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 SLC25A31Q9H0C2 315 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 PCED1AQ9H1Q7 454 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 C12orf49Q9H741 205 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 METTL8Q9H825 291 aaKnown RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 IL21Q9HBE4 155 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ARL15Q9NXU5 204 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 CRLS1Q9UJA2 301 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 DYRK1BQ9Y463 629 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 PLXND1Q9Y4D7 1925 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 PIKFYVEQ9Y2I7 2098 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 TRAV1-2A0A0B4J238 106 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 MYADML2A6NDP7 307 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 TMEM235A6NFC5 223 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 PYCARD-AS1I3L0S3 204 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 FBXO24O75426 580 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 CATP04040 527 aaKnown RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 IFNA6P05013 189 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 SLC25A4P12235 298 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 TPT1P13693 172 aaKnown RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 SELEP16581 610 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 AFF3P51826 1226 aaKnown RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 OR10A3P58181 314 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 RAB1AP62820 205 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 VAMP2P63027 116 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 EOGTQ5NDL2 527 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 TMEM164Q5U3C3 297 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 C1orf53Q5VUE5 145 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 KHDRBS2Q5VWX1 349 aaKnown RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF280BQ86YH2 543 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 MUC20Q8N307 709 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 OR1J1Q8NGS3 322 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 RCC1LQ96I51 464 aaKnown RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF700Q9H0M5 742 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 SLITRK2Q9H156 845 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 AHSPQ9NZD4 102 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 PTGFRNQ9P2B2 879 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 MYOTQ9UBF9 498 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 KCNE5Q9UJ90 142 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 DOCK6Q96HP0 2047 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 FFAR1O14842 300 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 KCNAB3O43448 404 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 TLX2O43763 284 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 OR2J2O76002 312 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 OR2C1O95371 312 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 SOX14O95416 240 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 SCGB1D2O95969 90 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 B3GALT4O96024 378 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 CD8AP01732 235 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 MBPP02686 304 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 C1QCP02747 245 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 MT-ND5P03915 603 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 LIMS3P0CW19 117 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 LIMS4P0CW20 117 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 NR2F1P10589 423 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 IMPA1P29218 277 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 FGF8P55075 233 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 TAS2R43P59537 309 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 TSPAN31Q12999 210 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 CHIT1Q13231 466 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 C18orf21Q32NC0 220 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 MOGAT2Q3SYC2 334 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 SYT14P1Q58G82 188 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 C11orf87Q6NUJ2 197 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 C22orf39Q6P5X5 142 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 KIRREL2Q6UWL6 708 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ESPNLQ6ZVH7 1005 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 KMT5CQ86Y97 462 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 C11orf42Q8N5U0 333 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 SLC30A7Q8NEW0 376 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 OR5AP2Q8NGF4 316 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 BRIX1Q8TDN6 353 aaKnown RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 FAM216AQ8WUB2 273 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms