RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	C7orf34	Q96L11	122 aa		9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178	CCT8L2	Q96SF2	557 aa		9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178	KCNK17	Q96T54	332 aa		9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SH3GL3	Q99963	347 aa		9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178	ALG12	Q9BV10	488 aa		9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178	REG4	Q9BYZ8	158 aa		9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178	NDEL1	Q9GZM8	345 aa		9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178	CD300A	Q9UGN4	299 aa		9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178	FBXO9	Q9UK97	447 aa	Predicted RBP	9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178	FKBP7	Q9Y680	259 aa		9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178		V9GYQ6	96 aa		9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178	HIVEP2	P31629	2446 aa		9.46	□□□□□ -0.9
PPP4R1-208	ENST00000578178	FN1	P02751	2386 aa	Known RBP	9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	ZAN	Q9Y493	2812 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	IGHV4-30-2	A0A087WSY4	118 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	VSTM5	A8MXK1	200 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	hCG_2039718	K7EN88	272 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	CDC42EP2	O14613	210 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	MGRN1	O60291	552 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	FAM107A	O95990	144 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SEMG1	P04279	462 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	CSF3	P09919	207 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	PATE4	P0C8F1	98 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	ZNF35	P13682	527 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	ITGA2	P17301	1181 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	NPR2	P20594	1047 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	THBS4	P35443	961 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	LIMS1	P48059	325 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	PPOX	P50336	477 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	MNAT1	P51948	309 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	EFNA4	P52798	201 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	DSCR9	P59020	149 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	CTXN1	P60606	82 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	VLDLR	P98155	873 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	FMOD	Q06828	376 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	FHL1	Q13642	323 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	RAB39A	Q14964	217 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	KRT72	Q14CN4	511 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SLC36A2	Q495M3	483 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SPATS1	Q496A3	300 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	GKAP1	Q5VSY0	366 aa	Predicted RBP	9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	TMEM53	Q6P2H8	277 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	PODNL1	Q6PEZ8	512 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	TBPL2	Q6SJ96	375 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	TMPRSS11F	Q6ZWK6	438 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SLC16A14	Q7RTX9	510 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	ZNF584	Q8IVC4	421 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	DEFB107A	Q8IZN7	70 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	ZNF525	Q8N782	197 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	FGFBP3	Q8TAT2	258 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	ZNF519	Q8TB69	540 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	FNDC8	Q8TC99	324 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	POM121	Q96HA1	1249 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	FAM46A	Q96IP4	442 aa	Known RBP	9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	DHRS1	Q96LJ7	313 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	NSMCE2	Q96MF7	247 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SORCS2	Q96PQ0	1159 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	TSPAN32	Q96QS1	320 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	CDRT15	Q96T59	188 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	RHNO1	Q9BSD3	238 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	PLK3	Q9H4B4	646 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	KRCC1	Q9NPI7	259 aa	Predicted RBP	9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SPEF1	Q9Y4P9	236 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	UGT2A1	Q9Y4X1	527 aa		9.45	□□□□□ -0.9
PPP4R1-208	ENST00000578178	ABCA1	O95477	2261 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	IGKV1D-43	A0A0B4J1Z2	117 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	TRBV4-1	A0A0J9YWV2	114 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178		A6NIZ1	184 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	DIRAS1	O95057	198 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SERPINA5	P05154	406 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	HOXB4	P17483	251 aa	Predicted RBP	9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	NR4A1	P22736	598 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	RPL4	P36578	427 aa	Known RBP	9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	RAP1B	P61224	184 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	RPS23	P62266	143 aa	Known RBP	9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	RAP1A	P62834	184 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	MRPS34	P82930	218 aa	Known RBP	9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	GALK2	Q01415	458 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SLC25A47	Q6Q0C1	308 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SVOPL	Q8N434	492 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	FITM2	Q8N6M3	262 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	CCDC197	Q8NCU1	140 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	MAPK1IP1L	Q8NDC0	245 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SLC30A7	Q8NEW0	376 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	OR10H5	Q8NGA6	315 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	NSMAF	Q92636	917 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	MRPL24	Q96A35	216 aa	Known RBP	9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	NABP1	Q96AH0	204 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	MCUR1	Q96AQ8	359 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	PYURF	Q96I23	114 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	TNFRSF13C	Q96RJ3	184 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	VRK1	Q99986	396 aa	Predicted RBP	9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	C1orf198	Q9H425	327 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	RNF121	Q9H920	327 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	SLC7A8	Q9UHI5	535 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	ZNF346	Q9UL40	294 aa	Known RBP	9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	CMAHP	Q9Y471	501 aa		9.44	□□□□□ -0.9
PPP4R1-208	ENST00000578178	CHD3	Q12873	2000 aa	Known RBP	9.43	□□□□□ -0.9
PPP4R1-208	ENST00000578178		A0A096LNT2	108 aa		9.43	□□□□□ -0.9
PPP4R1-208	ENST00000578178	GPRIN2	O60269	458 aa		9.43	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms