RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 RIT1Q92963 219 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 NCLNQ969V3 563 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 PPWD1Q96BP3 646 aaKnown RBP4.29□□□□□ -1.72
KARSP3-201ENST00000571212 TAMM41Q96BW9 452 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 FAM120BQ96EK7 910 aaKnown RBP4.29□□□□□ -1.72
KARSP3-201ENST00000571212 DGAT2Q96PD7 388 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 DOK1Q99704 481 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 LMF2Q9BU23 707 aaKnown RBP4.29□□□□□ -1.72
KARSP3-201ENST00000571212 POLDIP3Q9BY77 421 aaKnown RBP4.29□□□□□ -1.72
KARSP3-201ENST00000571212 ARMC7Q9H6L4 198 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 ZDHHC11Q9H8X9 412 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 MIEF1Q9NQG6 463 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 G6PC2Q9NQR9 355 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 SLC6A13Q9NSD5 602 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 SLC25A37Q9NYZ2 338 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 CCDC167Q9P0B6 97 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 BCAP29Q9UHQ4 241 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 DIMT1Q9UNQ2 313 aaKnown RBP4.29□□□□□ -1.72
KARSP3-201ENST00000571212 RPH3AQ9Y2J0 694 aaPredicted RBP4.29□□□□□ -1.72
KARSP3-201ENST00000571212 AP4S1Q9Y587 144 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 ZNF780BQ9Y6R6 833 aa4.29□□□□□ -1.72
KARSP3-201ENST00000571212 NSD1Q96L73 2696 aaPredicted RBP4.29□□□□□ -1.72
KARSP3-201ENST00000571212 ARID1AO14497 2285 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 JMJD1CQ15652 2540 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 A0A096LPI6 279 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 TRBV11-1A0A0K0K1C0 115 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 BBIP1A8MTZ0 92 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 C17orf105B2RV13 164 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 NPIPA2E9PIF3 369 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 NPIPA3F8WFD2 350 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 TOR1AO14656 332 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 CFLARO15519 480 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 PRKNO60260 465 aaPredicted RBP4.28□□□□□ -1.72
KARSP3-201ENST00000571212 ZNF354AO60765 605 aaPredicted RBP4.28□□□□□ -1.72
KARSP3-201ENST00000571212 PDE9AO76083 593 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 NKX2-2O95096 273 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 LRATO95237 230 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 SELLP14151 372 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 GPX2P18283 190 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 UQCRC2P22695 453 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 S100A3P33764 101 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 HPCAL1P37235 193 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 CDKN2CP42773 168 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 PPICP45877 212 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 PCP4P48539 62 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 SSR4P51571 173 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 NCBP2P52298 156 aaKnown RBP eCLIP4.28□□□□□ -1.72
KARSP3-201ENST00000571212 DLX5P56178 289 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 DCAF7P61962 342 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 PPIAP62937 165 aaKnown RBP4.28□□□□□ -1.72
KARSP3-201ENST00000571212 MYBPC1Q00872 1141 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 SNTA1Q13424 505 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 SELPLGQ14242 412 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 LTB4RQ15722 352 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 MAPK11Q15759 364 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 TRIM16LQ309B1 348 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 SLC25A35Q3KQZ1 300 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 VPS26BQ4G0F5 336 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 RUNDC3AQ59EK9 446 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 HEPHL1Q6MZM0 1159 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 ANKRD26P1Q6NSI1 321 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 ZFP1Q6P2D0 407 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 TMEM88Q6PEY1 159 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 ARSKQ6UWY0 536 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 ADCK1Q86TW2 530 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 BIVMQ86UB2 503 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 SLC22A16Q86VW1 577 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 GPALPP1Q8IXQ4 340 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 CCDC36Q8IYA8 594 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 CLECL1Q8IZS7 167 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 ASCC1Q8N9N2 400 aaKnown RBP4.28□□□□□ -1.72
KARSP3-201ENST00000571212 TSPAN14Q8NG11 270 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 OR10Q1Q8NGQ4 319 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 OR9A2Q8NGT5 310 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 CAPSLQ8WWF8 208 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 EXOSC8Q96B26 276 aaKnown RBP4.28□□□□□ -1.72
KARSP3-201ENST00000571212 MOAP1Q96BY2 351 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 NEURL3Q96EH8 262 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 TXNDC15Q96J42 360 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 RILPQ96NA2 401 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 OR52E6Q96RD3 313 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 STACQ99469 402 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 SLC29A1Q99808 456 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 TTYH2Q9BSA4 534 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 INPP5KQ9BT40 448 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 C6orf62Q9GZU0 229 aaPredicted RBP4.28□□□□□ -1.72
KARSP3-201ENST00000571212 DEFB127Q9H1M4 99 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 LIME1Q9H400 295 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 RMND5AQ9H871 391 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 CHODLQ9H9P2 273 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 TIGARQ9NQ88 270 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 PNPLA3Q9NST1 481 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 DEPPQ9NTK1 212 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 VAPAQ9P0L0 249 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 ENOPH1Q9UHY7 261 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 SLC13A4Q9UKG4 626 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 YARS2Q9Y2Z4 477 aaKnown RBP4.28□□□□□ -1.72
KARSP3-201ENST00000571212 NDUFAF1Q9Y375 327 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 CLCA3PQ9Y6N3 262 aa4.28□□□□□ -1.72
KARSP3-201ENST00000571212 CSPG4Q6UVK1 2322 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms