RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PKP2Q99959 881 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 NAA11Q9BSU3 229 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-213ENST00000550629 SF3B5Q9BWJ5 86 aaKnown RBP5.1□□□□□ -1.59
SCAF11-213ENST00000550629 DGCR6LQ9BY27 220 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 GABARAPL1Q9H0R8 117 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 TMEM185BQ9H7F4 350 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 COQ10BQ9H8M1 238 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 RNF122Q9H9V4 155 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF556Q9HAH1 456 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 RNPEPL1Q9HAU8 725 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 FANCFQ9NPI8 374 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 MEPEQ9NQ76 525 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-213ENST00000550629 NANSQ9NR45 359 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 GLRX2Q9NS18 164 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 ENOPH1Q9UHY7 261 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 MCTS1Q9ULC4 181 aaKnown RBP5.1□□□□□ -1.59
SCAF11-213ENST00000550629 MGAT4BQ9UQ53 548 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 CAMK2AQ9UQM7 478 aa5.1□□□□□ -1.59
SCAF11-213ENST00000550629 RRP15Q9Y3B9 282 aaKnown RBP5.1□□□□□ -1.59
SCAF11-213ENST00000550629 UBR5O95071 2799 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-213ENST00000550629 FAM208BQ5VWN6 2430 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 CACNA1BQ00975 2339 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 IGKV3D-15A0A087WSY6 115 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 A0A1W2PNV4 684 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 MBD3L4A6NDZ8 208 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 MBD3L3A6NE82 208 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 WIPF3A6NGB9 483 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 MBD3L5A6NJ08 208 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 SLC22A20A6NK97 555 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 EIF4E1BA6NMX2 242 aaKnown RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 CLCA1A8K7I4 914 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 NPIPA2E9PIF3 369 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 NPIPA3F8WFD2 350 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 KPNA4O00629 521 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 PLPP3O14495 311 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 GPR171O14626 319 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 TNFSF11O14788 317 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 CASQ2O14958 399 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 SMAD9O15198 467 aaKnown RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 CXCL13O43927 109 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 OR10H3O60404 316 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 CYTIPO60759 359 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 WISP2O76076 250 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 NXPH3O95157 252 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 CH25HO95992 272 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 HPRP00739 348 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 CRHP06850 196 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 HNRNPCP07910 306 aaKnown RBP eCLIP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 STSP08842 583 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 SAGP10523 405 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 IFI30P13284 250 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 APEHP13798 732 aaKnown RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 NDUFB7P17568 137 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 CBLP22681 906 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 GTF2E2P29084 291 aaKnown RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 GRPRP30550 384 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 UQCRC1P31930 480 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 LIPAP38571 399 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 RPS5P46782 204 aaKnown RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 UCP3P55916 312 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 OR2B6P58173 313 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 PRPS1P60891 318 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 HSF1Q00613 529 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 SRYQ05066 204 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 SLC34A1Q06495 639 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 ZP4Q12836 540 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 TSPAN31Q12999 210 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 OR7A5Q15622 319 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 C1orf185Q5T7R7 199 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 PGBD2Q6P3X8 592 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 MTFR2Q6P444 385 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 TBPL2Q6SJ96 375 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 SLC46A3Q7Z3Q1 461 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 HDDC2Q7Z4H3 204 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 NANOGNBQ7Z5D8 188 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 PXKQ7Z7A4 578 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 ZER1Q7Z7L7 766 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 OAFQ86UD1 273 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 DOLPP1Q86YN1 238 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 P3H2Q8IVL5 708 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 UBQLNLQ8IYU4 475 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 PARP8Q8N3A8 854 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 C10orf53Q8N6V4 93 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 PACRGLQ8N7B6 248 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 AQP11Q8NBQ7 271 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 ATP6V1C2Q8NEY4 427 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 OR10G2Q8NGC3 310 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 PFN4Q8NHR9 129 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 MBD3L2Q8NHZ7 208 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 GNPDA2Q8TDQ7 276 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 RNF128Q8TEB7 428 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 SMPDL3BQ92485 455 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 DPF1Q92782 380 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 MOGAT1Q96PD6 335 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 FEVQ99581 238 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 RBM4BQ9BQ04 359 aaKnown RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 TUBA1CQ9BQE3 449 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 C9orf16Q9BUW7 83 aa5.09□□□□□ -1.59
SCAF11-213ENST00000550629 RBM4Q9BWF3 364 aaKnown RBP5.09□□□□□ -1.59
SCAF11-213ENST00000550629 UCK2Q9BZX2 261 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms