RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 F5H0A9 414 aaPredicted RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 H3BUX3 64 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 AP3B1O00203 1094 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 FBP2O00757 339 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 LDLRAD4O15165 306 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 CCNT2O60583 730 aaKnown RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 SLC22A3O75751 556 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 H6PDO95479 791 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 OXSR1O95747 527 aaPredicted RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 KLK1P06870 262 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 WNT2P09544 360 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 GABRA3P34903 492 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 BSGP35613 385 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 MDH2P40926 338 aaKnown RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 SLC1A2P43004 574 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 PITPNBP48739 271 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 HSPA7P48741 367 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 MMP15P51511 669 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 LUMP51884 338 aaPredicted RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 MAPK12P53778 367 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 SLC16A1P53985 500 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 FOXA1P55317 472 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 ARF1P84077 181 aaKnown RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 ZNF763Q0D2J5 394 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 TRAF3Q13114 568 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 E2F2Q14209 437 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 ZMYND11Q15326 602 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 GLE1Q53GS7 698 aaKnown RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 RNASE12Q5GAN4 147 aaKnown RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 PRAMEF8Q5VWM4 474 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 PRAMEF7Q5VXH5 474 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 SLC48A1Q6P1K1 146 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 BCDIN3DQ7Z5W3 292 aaKnown RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 GPAT4Q86UL3 456 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 KLBQ86Z14 1044 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 MISPQ8IVT2 679 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 KATNAL2Q8IYT4 538 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 MMGT1Q8N4V1 131 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 OR51D1Q8NGF3 324 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 OR4C3Q8NH37 302 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 MAGEE2Q8TD90 523 aaPredicted RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 GPR151Q8TDV0 419 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 GEMIN6Q8WXD5 167 aaKnown RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 ESAMQ96AP7 390 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 AMDHD1Q96NU7 426 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 WDFY2Q96P53 400 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 KLHDC3Q9BQ90 382 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 NAA11Q9BSU3 229 aaPredicted RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 KIFC1Q9BW19 673 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 OSBPL8Q9BZF1 889 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 TSGA10Q9BZW7 698 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 DDX31Q9H8H2 851 aaKnown RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 C20orf96Q9NUD7 363 aaPredicted RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 TMEM106BQ9NUM4 274 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 GIMAP4Q9NUV9 329 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 ADPRHL2Q9NX46 363 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 MKS1Q9NXB0 559 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 DCAF16Q9NXF7 216 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 ZNRD1Q9P1U0 126 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 B3GAT1Q9P2W7 334 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 CLN8Q9UBY8 286 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 MIOXQ9UGB7 285 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 NDRG4Q9ULP0 352 aaKnown RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 CARD8Q9Y2G2 431 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 ZNF256Q9Y2P7 627 aaPredicted RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 FLVCR1Q9Y5Y0 555 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 SPIN1Q9Y657 262 aaPredicted RBP3.15□□□□□ -1.91
YBX3-205ENST00000536107 KMT2AQ03164 3969 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 MUC4Q99102 2169 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 DOCK11Q5JSL3 2073 aa3.15□□□□□ -1.91
YBX3-205ENST00000536107 A0A1B0GVY2 172 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 GXYLT2A0PJZ3 443 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 MEIOCA2RUB1 952 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 H3BNH8 94 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 M0QYG6 137 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 STK16O75716 305 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 RAB36O95755 333 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 IGF2P01344 180 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 IGHV1-46P01743 117 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 HLA-HP01893 362 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 SERPING1P05155 500 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 ZNF35P13682 527 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 ETS1P14921 441 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 RHCEP18577 417 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 CCNA2P20248 432 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 FPR3P25089 353 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 PPIFP30405 207 aaKnown RBP3.14□□□□□ -1.91
YBX3-205ENST00000536107 PIK3CBP42338 1070 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 VDAC2P45880 294 aaPredicted RBP3.14□□□□□ -1.91
YBX3-205ENST00000536107 MARCKSL1P49006 195 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 P2RX1P51575 399 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 TERF1P54274 439 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 CDKN2DP55273 166 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 SH3BGRP55822 239 aaPredicted RBP3.14□□□□□ -1.91
YBX3-205ENST00000536107 ARF6P62330 175 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 PSG6Q00889 435 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 ROR2Q01974 943 aaKnown RBP3.14□□□□□ -1.91
YBX3-205ENST00000536107 ZNF117Q03924 483 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 MERTKQ12866 999 aa3.14□□□□□ -1.91
YBX3-205ENST00000536107 COX10Q12887 443 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms