RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ZNF611Q8N823 705 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 AQP11Q8NBQ7 271 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 HTRA1Q92743 480 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 UTP4Q969X6 686 aaKnown RBP19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 RASD2Q96D21 266 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 MBD6Q96DN6 1003 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 RADILQ96JH8 1075 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 ZNF570Q96NI8 536 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 NOX3Q9HBY0 568 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 IER3IP1Q9Y5U9 82 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 H7C1C5 153 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 EBAG9O00559 213 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 TXNDC12O95881 172 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 CECR9P0C854 216 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 OR8G3PP0DMU2 310 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 CD79AP11912 226 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 NR2C1P13056 603 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 APEHP13798 732 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 CAPZA2P47755 286 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 LCN6P62502 163 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 KRR1Q13601 381 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 NRN1LQ496H8 165 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 C1orf146Q5VVC0 180 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 FGFBP3Q8TAT2 258 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 FNDC8Q8TC99 324 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 NSMAFQ92636 917 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 SAMD8Q96LT4 415 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 RBP7Q96R05 134 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 YY1AP1Q9H869 796 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 SEC61A2Q9H9S3 476 aa19.78■□□□□ 0.76
SFSWAP-204ENST00000535399 SLC22A23A1A5C7 686 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 PPP1R3DO95685 299 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 CELA3BP08861 270 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 SLC6A6P31641 620 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 RPS6KA3P51812 740 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 CDH11P55287 796 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 SLC22A25Q6T423 547 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 TMEM179BQ7Z7N9 219 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 MYPOPQ86VE0 399 aaPredicted RBP19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 OR10G2Q8NGC3 310 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 IGFBPL1Q8WX77 278 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 NANOS1Q8WY41 292 aaKnown RBP19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 ZNF75AQ96N20 296 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 SH3GL3Q99963 347 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 DGCR6LQ9BY27 220 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 CDH10Q9Y6N8 788 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 OTOGQ6ZRI0 2925 aa19.77■□□□□ 0.76
SFSWAP-204ENST00000535399 PRSS37A4D1T9 235 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 XKRYO14609 159 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 AHCYL1O43865 530 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 ENTPD5O75356 428 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 PATE4P0C8F1 98 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 CDAP32320 146 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 ARR3P36575 388 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 IDH3GP51553 393 aaPredicted RBP19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 MRPS34P82930 218 aaKnown RBP19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 PIGFQ07326 219 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 CCNIQ14094 377 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 GSG1Q2KHT4 349 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 B3GLCTQ6Y288 498 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 FBXW5Q969U6 566 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 NABP1Q96AH0 204 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 EGLN3Q9H6Z9 239 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 CISD1Q9NZ45 108 aaKnown RBP19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 DNAJB9Q9UBS3 223 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 ITGB1BP2Q9UKP3 347 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 MOKQ9UQ07 419 aa19.76■□□□□ 0.75
SFSWAP-204ENST00000535399 RAI1Q7Z5J4 1906 aaPredicted RBP19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 E7EQL1 145 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 SOCS2O14508 198 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 IMPA2O14732 288 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 ARPC3O15145 178 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 UBL3O95164 117 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 FARS2O95363 451 aaKnown RBP19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 CDKN2AP42771 156 aaKnown RBP19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 NAAAQ02083 359 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 RASSF6Q6ZTQ3 369 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 FOXL2NBQ6ZUU3 175 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 PTCHD4Q6ZW05 846 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 ADCK1Q86TW2 530 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 GIPC3Q8TF64 312 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 GTPBP3Q969Y2 492 aaKnown RBP19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 ERMAPQ96PL5 475 aaPredicted RBP19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 CCL19Q99731 98 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 SIAEQ9HAT2 523 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 IL20Q9NYY1 176 aa19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 VSX1Q9NZR4 365 aaPredicted RBP19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.75■□□□□ 0.75
SFSWAP-204ENST00000535399 ARRDC5A6NEK1 342 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 ATP6V1G2-DDX39BF2Z307 99 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 GNGT2O14610 69 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 CIB2O75838 187 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 NPR2P20594 1047 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 CALCRP30988 508 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 GIPRP48546 466 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 RAB1AP62820 205 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 NPRL3Q12980 569 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 TESK1Q15569 626 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 ETFDHQ16134 617 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 DEFB113Q30KQ7 82 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms