RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FASTKD3Q14CZ7 662 aaKnown RBP3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 GOLGA7BQ2TAP0 167 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 SNAI3Q3KNW1 292 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 TFDP3Q5H9I0 405 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 ADAMTSL4-AS1Q5T5F5 129 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 CYB5R2Q6BCY4 276 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 BTNL3Q6UXE8 466 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 APOOLQ6UXV4 268 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 CCDC50Q8IVM0 306 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 CDH26Q8IXH8 852 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 UBQLNLQ8IYU4 475 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZSCAN4Q8NAM6 433 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 RELL2Q8NC24 303 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 COQ2Q96H96 371 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 SH3YL1Q96HL8 342 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 RPRD1AQ96P16 312 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 CCDC77Q9BR77 488 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 ULBP1Q9BZM6 244 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 SLC25A51Q9H1U9 297 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZNF160Q9HCG1 818 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 FANCFQ9NPI8 374 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 PLCXD1Q9NUJ7 323 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 CHRNA9Q9UGM1 479 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 CLEC4AQ9UMR7 237 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 YLPM1P49750 1951 aaKnown RBP3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 PLXNB1O43157 2135 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 PRR14LQ5THK1 2151 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 TRAV26-1A0A087WT03 109 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 MFSD2BA6NFX1 497 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 TM9SF1O15321 606 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 TRIM3O75382 744 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 ASS1P00966 412 aaKnown RBP3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 RHOCP08134 193 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 H2BFMP0C1H6 154 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 PATE4P0C8F1 98 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 TNNI1P19237 187 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 NCF2P19878 526 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 MMP11P24347 488 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 UCP1P25874 307 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 SPRP35270 261 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 ACVR1BP36896 505 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 RAG2P55895 527 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 MYL6P60660 151 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 PPP1CAP62136 330 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 UBE2HP62256 183 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 GNB1P62873 340 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 MRPL28Q13084 256 aaKnown RBP3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 RAB35Q15286 201 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 SYPL1Q16563 259 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 MOGAT2Q3SYC2 334 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 GPRC6AQ5T6X5 926 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 CARM1Q86X55 608 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR10A7Q8NGE5 316 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 ADIPOR1Q96A54 375 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZNF501Q96CX3 271 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 PIK3IP1Q96FE7 263 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 CCT8L2Q96SF2 557 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 TMEM43Q9BTV4 400 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 PARLQ9H300 379 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 ELOVL3Q9HB03 270 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 EML4Q9HC35 981 aaKnown RBP3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 ABCC13Q9NSE7 274 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 B4GALT7Q9UBV7 327 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 MTRF1LQ9UGC7 380 aaKnown RBP3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 HMGXB4Q9UGU5 601 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 EXOGQ9Y2C4 368 aaKnown RBP3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 CAB39Q9Y376 341 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 NAALAD2Q9Y3Q0 740 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 GMPPBQ9Y5P6 360 aa3.83□□□□□ -1.8
HMGB1P23-201ENST00000518743 IGHV4-30-2A0A087WSY4 118 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 IGHV3-38A0A0C4DH36 116 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 BTN3A3O00478 584 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 PPIHO43447 177 aaKnown RBP3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 TYROBPO43914 113 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 DEXIO95424 95 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 IGLV3-27P01718 113 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 IGHG1P01857 330 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 HBQ1P09105 142 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR9G9P0C7N8 305 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZNF26P17031 533 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 PGCP20142 388 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 PAX7P23759 505 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 EFNA3P52797 238 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 FKBP3Q00688 224 aaKnown RBP3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 ADIGQ0VDE8 80 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 UBE2V2Q15819 145 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 TMEM52BQ4KMG9 183 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 KLHL22Q53GT1 634 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 REP15Q6BDI9 236 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 PNCKQ6P2M8 343 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 METAP1DQ6UB28 335 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZYG11AQ6WRX3 759 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZNF841Q6ZN19 808 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 SHISA6Q6ZSJ9 500 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 MOB3BQ86TA1 216 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 IFNEQ86WN2 208 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 RNF130Q86XS8 419 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 TGIF2LXQ8IUE1 241 aa3.82□□□□□ -1.8
HMGB1P23-201ENST00000518743 UBE2J2Q8N2K1 259 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms