RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 SNX18Q96RF0 628 aa11.52□□□□□ -0.57
CTDSP1-212ENST00000494067 INIPQ9NRY2 104 aa11.52□□□□□ -0.57
CTDSP1-212ENST00000494067 ARMCX1Q9P291 453 aa11.52□□□□□ -0.57
CTDSP1-212ENST00000494067 MED31Q9Y3C7 131 aa11.52□□□□□ -0.57
CTDSP1-212ENST00000494067 IGKV1D-43A0A0B4J1Z2 117 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 LOC100653049A0A140TA62 436 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 HTR3EA5X5Y0 456 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 GMNCA6NCL1 334 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 LYNX1G3V0Z9 82 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 KRT34O76011 436 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 OR7A10O76100 309 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 OR5F1O95221 314 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 IGF2P01344 180 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 MT-ND5P03915 603 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 F13BP05160 661 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 LYNX1P0DP58 116 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 THRBP10828 461 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 TCN1P20061 433 aaPredicted RBP11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 SRP14P37108 136 aaKnown RBP11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 GUCA1AP43080 201 aaPredicted RBP11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 ALDH3B1P43353 468 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 GPR6P46095 362 aaPredicted RBP11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 MYBPC1Q00872 1141 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 RPL18Q07020 188 aaKnown RBP11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 FXNQ16595 210 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 NKPD1Q17RQ9 610 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 CR1LQ2VPA4 569 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 UNQ6126/PRO20091Q6UXV3 157 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 IL17RELQ6ZVW7 336 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 PHC2Q8IXK0 858 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 POU5F2Q8N7G0 328 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 RBM15BQ8NDT2 890 aaKnown RBP11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 OR4K5Q8NGD3 323 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 MOSPD2Q8NHP6 518 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 C10orf82Q8WW14 230 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 TMEM239Q8WW34 195 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 C11orf40Q8WZ69 217 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 LZICQ8WZA0 190 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 MCHR2Q969V1 340 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 ZNF347Q96SE7 839 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 SH3GL3Q99963 347 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 CCNB1IP1Q9NPC3 277 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 SLCO1C1Q9NYB5 712 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 RIMS3Q9UJD0 308 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 FZR1Q9UM11 496 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 AP3M1Q9Y2T2 418 aa11.51□□□□□ -0.57
CTDSP1-212ENST00000494067 MXRA5Q9NR99 2828 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 LILRA1O75019 489 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 LCKP06239 509 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 TSPAN19P0C672 248 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 FAM157BP0CG42 384 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 ACADSP16219 412 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 DRD4P21917 467 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 ACHEP22303 614 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 APLNRP35414 380 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 AQP2P41181 271 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 TMEM33P57088 247 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 HSF2Q03933 536 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 ST3GAL3Q11203 375 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 RIN1Q13671 783 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 MAD2L1BPQ15013 274 aaPredicted RBP11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 HIST3H3Q16695 136 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 LRRC23Q53EV4 343 aaPredicted RBP11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 TMEM154Q6P9G4 183 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 MEX3DQ86XN8 651 aaKnown RBP11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 SYT14Q8NB59 555 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 NOXO1Q8NFA2 376 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 SYNPRQ8TBG9 265 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 ASB10Q8WXI3 467 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 RCN3Q96D15 328 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 TPD52L3Q96J77 140 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 SEPHS2Q99611 448 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 ZNF416Q9BWM5 594 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 MRPL13Q9BYD1 178 aaKnown RBP11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 BCL2L14Q9BZR8 327 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 CMTM6Q9NX76 183 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 EIF3KQ9UBQ5 218 aaKnown RBP11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 TMEFF2Q9UIK5 374 aaPredicted RBP11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 SNX13Q9Y5W8 968 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 RTTNQ86VV8 2226 aa11.5□□□□□ -0.57
CTDSP1-212ENST00000494067 FAM220BPB1ANY3 271 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 B4DSR2 109 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 TPD52L2O43399 206 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 TRMUO75648 421 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 CCL2P13500 99 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 SEC24CP53992 1094 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 CDH15P55291 814 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 KLF3P57682 345 aaPredicted RBP11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 ERVS71-1P61550 626 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 MRPS11P82912 194 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 SRSF2Q01130 221 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 TEKQ02763 1124 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 FHL1Q13642 323 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 TAF11Q15544 211 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 TRIP10Q15642 601 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 CYBRD1Q53TN4 286 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 TMEM255AQ5JRV8 349 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 LRRC18Q8N456 261 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 CLDN22Q8N7P3 220 aa11.49□□□□□ -0.57
CTDSP1-212ENST00000494067 ICA1LQ8NDH6 482 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 258.9 ms