RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 PAX7P23759 505 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 CLRN1P58418 232 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 ERVS71-1P61550 626 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 LOXL1Q08397 574 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-212ENST00000493940 DBPQ10586 325 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-212ENST00000493940 TMEM249Q2WGJ8 235 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 IFI44LQ53G44 452 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 TMEM255AQ5JRV8 349 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 SLC25A47Q6Q0C1 308 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 ARPINQ7Z6K5 226 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 PIGWQ7Z7B1 504 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 LRRC18Q8N456 261 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 CPEB3Q8NE35 698 aaKnown RBP10.85□□□□□ -0.67
HSPG2-212ENST00000493940 OR13C2Q8NGS9 318 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 TSPAN32Q96QS1 320 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 TXNIPQ9H3M7 391 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 YAE1D1Q9NRH1 226 aa10.85□□□□□ -0.67
HSPG2-212ENST00000493940 IGHV4-61A0A0C4DH41 118 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 A0A1W2PRG6 482 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 GMNCA6NCL1 334 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 MCIDASD6RGH6 385 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 GSTA4O15217 222 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 CLPTM1O96005 669 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 IGHG1P01857 330 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 IFNW1P05000 195 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 SERPINA5P05154 406 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 ADRA2AP08913 450 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 OR8G3PP0DMU2 310 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 IGHV4-31P0DP07 118 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 GPR4P46093 362 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 CTXN1P60606 82 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 SNRPD2P62316 118 aaKnown RBP10.84□□□□□ -0.67
HSPG2-212ENST00000493940 VLDLRP98155 873 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 TOP3AQ13472 1001 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-212ENST00000493940 MAD2L1BPQ15013 274 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-212ENST00000493940 TRAM2Q15035 370 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 SEC23BQ15437 767 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 ALG10Q5BKT4 473 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 C10orf128Q5T292 105 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 OTPQ5XKR4 325 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 GLYATQ6IB77 296 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 ZNF519Q8TB69 540 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 SLC7A13Q8TCU3 470 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 NSMAFQ92636 917 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 GPA33Q99795 319 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 KCTD14Q9BQ13 255 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-212ENST00000493940 SYT3Q9BQG1 590 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 FNDC11Q9BVV2 318 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 OR51B6Q9H340 312 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 TPK1Q9H3S4 243 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 NMNAT1Q9HAN9 279 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-212ENST00000493940 NDUFAF4Q9P032 175 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 TANC2Q9HCD6 1990 aa10.84□□□□□ -0.67
HSPG2-212ENST00000493940 WNK2Q9Y3S1 2297 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 LOC100509620A0A075B734 347 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 H7C1C5 153 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 PTP4A3O75365 173 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 UBL3O95164 117 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 FAM157BP0CG42 384 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 TCN1P20061 433 aaPredicted RBP10.83□□□□□ -0.68
HSPG2-212ENST00000493940 APEX1P27695 318 aaKnown RBP10.83□□□□□ -0.68
HSPG2-212ENST00000493940 IL2RGP31785 369 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 GLRXP35754 106 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 ALDH3B1P43353 468 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 NR4A2P43354 598 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 PPOXP50336 477 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 FXYD6P3P58550 94 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 DSCR9P59020 149 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 RPL27P61353 136 aaKnown RBP10.83□□□□□ -0.68
HSPG2-212ENST00000493940 LCN6P62502 163 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 GNGT1P63211 74 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 C6orf52Q5T4I8 152 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 PODNL1Q6PEZ8 512 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 FKBP9P1Q75LS8 142 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 ARIH2OSQ8N7S6 290 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 IL17RDQ8NFM7 739 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 GEMIN6Q8WXD5 167 aaKnown RBP10.83□□□□□ -0.68
HSPG2-212ENST00000493940 GTF3AQ92664 365 aaKnown RBP10.83□□□□□ -0.68
HSPG2-212ENST00000493940 FAM162AQ96A26 154 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 MRPL24Q96A35 216 aaKnown RBP10.83□□□□□ -0.68
HSPG2-212ENST00000493940 FUZQ9BT04 418 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 DCAF13Q9NV06 445 aaKnown RBP10.83□□□□□ -0.68
HSPG2-212ENST00000493940 CD300AQ9UGN4 299 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 AP3M1Q9Y2T2 418 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 ADAM18Q9Y3Q7 739 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 CMAHPQ9Y471 501 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 ENPP4Q9Y6X5 453 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 DYSFO75923 2080 aa10.83□□□□□ -0.68
HSPG2-212ENST00000493940 TRBV4-1A0A0J9YWV2 114 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 LRP5LA4QPB2 252 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 EFCAB9A8MZ26 197 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 STAMBPO95630 424 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 RAB36O95755 333 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 IGHMP01871 453 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 SEMG1P04279 462 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 SLC25A16P16260 332 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 ZNF32P17041 273 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 COL8A2P25067 703 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 PRDX6P30041 224 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 LIMS1P48059 325 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms