RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 GCNT2Q8N0V5 402 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 ULBP2Q9BZM5 246 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 RACGAP1Q9H0H5 632 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 WDR76Q9H967 626 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 SEC61A2Q9H9S3 476 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 BCO1Q9HAY6 547 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 FGF20Q9NP95 211 aaPredicted RBP12.85□□□□□ -0.35
GCA-210ENST00000487445 CLCF1Q9UBD9 225 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 ERGIC3Q9Y282 383 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 A0A1W2PPL8 197 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 DAPL1A0PJW8 107 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 ERVH48-1M5A8F1 160 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 UPK3AO75631 287 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 KRT33AO76009 404 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 NR2C1P13056 603 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 RPS27P42677 84 aaKnown RBP12.85□□□□□ -0.35
GCA-210ENST00000487445 ETV1P50549 477 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 NR1H2P55055 460 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 GGTLC2Q14390 218 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 HIST3H3Q16695 136 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 MEP1BQ16820 701 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 ACSF3Q4G176 576 aaPredicted RBP12.85□□□□□ -0.35
GCA-210ENST00000487445 C3P1Q6ZMU1 363 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 ACBD7Q8N6N7 88 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 POMGNT2Q8NAT1 580 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 OR6N2Q8NGY6 317 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 FNDC8Q8TC99 324 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 TMEM54Q969K7 222 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 CNTNAP3BQ96NU0 1288 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 SLX1AQ9BQ83 275 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 RBM24Q9BX46 236 aaKnown RBP12.85□□□□□ -0.35
GCA-210ENST00000487445 CDCA4Q9BXL8 241 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 CNTNAP3Q9BZ76 1288 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 TTTY10Q9BZA0 68 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 RNF122Q9H9V4 155 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 ACOT13Q9NPJ3 140 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 PARPBPQ9NWS1 579 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 ALPK2Q86TB3 2170 aa12.85□□□□□ -0.35
GCA-210ENST00000487445 MAP1BP46821 2468 aaKnown RBP12.84□□□□□ -0.35
GCA-210ENST00000487445 TPRP12270 2363 aaKnown RBP12.84□□□□□ -0.35
GCA-210ENST00000487445 ACACBO00763 2458 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 TRIM64CA6NLI5 447 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 ZNF724A8MTY0 619 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 MYL12BO14950 172 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 PTHP01270 115 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 TFP02787 698 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 PCMT1P22061 227 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 EDNRAP25101 427 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 CDAP32320 146 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 RPL5P46777 297 aaKnown RBP12.84□□□□□ -0.35
GCA-210ENST00000487445 MED22Q15528 200 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 XAF1Q6GPH4 301 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 NUFIP2Q7Z417 695 aaKnown RBP12.84□□□□□ -0.35
GCA-210ENST00000487445 GLB1L2Q8IW92 636 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 SLC35F2Q8IXU6 374 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 C20orf196Q8IYI0 205 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 GPR137CQ8N3F9 429 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 HTRA1Q92743 480 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 TMEM45BQ96B21 275 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 INTS12Q96CB8 462 aaKnown RBP12.84□□□□□ -0.35
GCA-210ENST00000487445 NMD3Q96D46 503 aaKnown RBP12.84□□□□□ -0.35
GCA-210ENST00000487445 ALKBH3Q96Q83 286 aaPredicted RBP12.84□□□□□ -0.35
GCA-210ENST00000487445 INTS14Q96SY0 518 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 C12orf49Q9H741 205 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 FOXD3Q9UJU5 478 aaPredicted RBP12.84□□□□□ -0.35
GCA-210ENST00000487445 EXOSC1Q9Y3B2 195 aaKnown RBP12.84□□□□□ -0.35
GCA-210ENST00000487445 PCDHGB1Q9Y5G3 927 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 DNAJC13O75165 2243 aa12.84□□□□□ -0.35
GCA-210ENST00000487445 A0A1W2PQL4 384 aaPredicted RBP12.83□□□□□ -0.35
GCA-210ENST00000487445 FIGNL2A6NMB9 653 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 CENPBD1B2RD01 187 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 J3QRE1 110 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 LCKP06239 509 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 GABRA1P14867 456 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 ZNF823P16415 610 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 BLVRAP53004 296 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 ADAM8P78325 824 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 SF3B4Q15427 424 aaKnown RBP eCLIP12.83□□□□□ -0.35
GCA-210ENST00000487445 SLC25A47Q6Q0C1 308 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 TIGD4Q8IY51 512 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 ZNF100Q8IYN0 542 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 C9orf106Q8NAJ2 232 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 FAM57AQ8TBR7 257 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 RORBQ92753 470 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 WNT2BQ93097 391 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 APH1AQ96BI3 265 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 GMPPAQ96IJ6 420 aaPredicted RBP12.83□□□□□ -0.35
GCA-210ENST00000487445 CRLF2Q9HC73 371 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 ERVK13-1Q9NX77 482 aa12.83□□□□□ -0.35
GCA-210ENST00000487445 PRRC2CQ9Y520 2896 aaKnown RBP12.83□□□□□ -0.36
GCA-210ENST00000487445 ZNF593O00488 134 aaPredicted RBP12.83□□□□□ -0.36
GCA-210ENST00000487445 DHHO43323 396 aa12.83□□□□□ -0.36
GCA-210ENST00000487445 WDR1O75083 606 aa12.83□□□□□ -0.36
GCA-210ENST00000487445 INMTO95050 263 aa12.83□□□□□ -0.36
GCA-210ENST00000487445 IGHA1P01876 353 aa12.83□□□□□ -0.36
GCA-210ENST00000487445 SPARCP09486 303 aa12.83□□□□□ -0.36
GCA-210ENST00000487445 LIMS3P0CW19 117 aa12.83□□□□□ -0.36
GCA-210ENST00000487445 LIMS4P0CW20 117 aa12.83□□□□□ -0.36
GCA-210ENST00000487445 HSMCR30P0CW71 290 aa12.83□□□□□ -0.36
GCA-210ENST00000487445 PSMB9P28065 219 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms