RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 LASP1Q14847 261 aaKnown RBP12.58□□□□□ -0.4
HDAC1-206ENST00000476391 TBC1D3GQ6DHY5 549 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 SPNS3Q6ZMD2 512 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 THSD4Q6ZMP0 1018 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 CD163Q86VB7 1156 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 SLC35F2Q8IXU6 374 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 SLC35F3Q8IY50 421 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 COMMD1Q8N668 190 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 TTC9BQ8N6N2 239 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 ZSCAN4Q8NAM6 433 aaPredicted RBP12.58□□□□□ -0.4
HDAC1-206ENST00000476391 AVL9Q8NBF6 648 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 CYB561A3Q8NBI2 242 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 OR2L5Q8NG80 312 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 AMDHD1Q96NU7 426 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 RNF126Q9BV68 326 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 SUCNR1Q9BXA5 334 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF350Q9GZX5 532 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 SLCO5A1Q9H2Y9 848 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 FKRPQ9H9S5 495 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 VSX1Q9NZR4 365 aaPredicted RBP12.58□□□□□ -0.4
HDAC1-206ENST00000476391 MDC1Q14676 2089 aaKnown RBP12.58□□□□□ -0.4
HDAC1-206ENST00000476391 A0A1W2PPE2 198 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 OR5H15A6NDH6 313 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 TMEM202A6NGA9 273 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 OR5H1A6NKK0 313 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 K7ERQ8 282 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 MTX2O75431 263 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 GLCEO94923 617 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 ZFPL1O95159 310 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF735P0CB33 412 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 MAKP20794 623 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 SERPINA4P29622 427 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 BSGP35613 385 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 PSMB10P40306 273 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 RABIFP47224 123 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 PRKAG1P54619 331 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 PLA2G7Q13093 441 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 GRB14Q14449 540 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 Q499Y3 187 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 MESTQ5EB52 335 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
HDAC1-206ENST00000476391 OR2A2Q6IF42 318 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 FAHD2BQ6P2I3 314 aaPredicted RBP12.58□□□□□ -0.4
HDAC1-206ENST00000476391 RFLNAQ6ZTI6 216 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 HIST3H2BBQ8N257 126 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 ACOT4Q8N9L9 421 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF610Q8N9Z0 462 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 SFXN5Q8TD22 340 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 RGP1Q92546 391 aaPredicted RBP12.58□□□□□ -0.4
HDAC1-206ENST00000476391 RSC1A1Q92681 617 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 R3HDM4Q96D70 268 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 RRNAD1Q96FB5 475 aaKnown RBP12.58□□□□□ -0.4
HDAC1-206ENST00000476391 FAHD2AQ96GK7 314 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 WNT5BQ9H1J7 359 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 STARD10Q9Y365 291 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 A0A0G2JLL6 359 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-206ENST00000476391 BRINP1O60477 761 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 DNAJB6O75190 326 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 SNAI1O95863 264 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-206ENST00000476391 HMGN2P05204 90 aaKnown RBP12.57□□□□□ -0.4
HDAC1-206ENST00000476391 FUT1P19526 365 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 CFPP27918 469 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 HTR2CP28335 458 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 CX3CR1P49238 355 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 IL13RA1P78552 427 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 TSTA3Q13630 321 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-206ENST00000476391 KHDRBS2Q5VWX1 349 aaKnown RBP12.57□□□□□ -0.4
HDAC1-206ENST00000476391 PRRT2Q7Z6L0 340 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-206ENST00000476391 PPP1R3BQ86XI6 285 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 BPIFB2Q8N4F0 458 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF740Q8NDX6 193 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 OR7G2Q8NG99 324 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 OR13C8Q8NGS7 320 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 ZG16BQ96DA0 208 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 PRSS27Q9BQR3 290 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 OR52A5Q9H2C5 316 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 SLC17A5Q9NRA2 495 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 MARCH5Q9NX47 278 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 SIGLEC7Q9Y286 467 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 HDGFL3Q9Y3E1 203 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 EEF1E1-BLOC1S5C9J1V9 151 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 DCTN6O00399 190 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 RTCAO00442 366 aaKnown RBP12.57□□□□□ -0.4
HDAC1-206ENST00000476391 OR1F1O43749 312 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 LRP3O75074 770 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 KLKB1P03952 638 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 ST6GAL1P15907 406 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 SPINT3P49223 89 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 HNRNPKP61978 463 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDAC1-206ENST00000476391 PPP1R1AQ13522 171 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 KHDC3LQ587J8 217 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 DCAF4L2Q8NA75 395 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 PLD4Q96BZ4 506 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 ZMYND19Q96E35 227 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-206ENST00000476391 LRFN5Q96NI6 719 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 AQP10Q96PS8 301 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 LGR4Q9BXB1 951 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 GPR174Q9BXC1 333 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 SMOC1Q9H4F8 434 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 SPACA1Q9HBV2 294 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms