RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ZNF239Q16600 458 aaKnown RBP11.09□□□□□ -0.63
UBR4-205ENST00000417040 CMTM4Q8IZR5 234 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 OR4A16Q8NH70 328 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 KLHL42Q9P2K6 505 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 FBXL4Q9UKA2 621 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 NDRG4Q9ULP0 352 aaKnown RBP11.09□□□□□ -0.63
UBR4-205ENST00000417040 TMED7Q9Y3B3 224 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 PRKNO60260 465 aaPredicted RBP11.08□□□□□ -0.64
UBR4-205ENST00000417040 FLI1Q01543 452 aaPredicted RBP11.08□□□□□ -0.64
UBR4-205ENST00000417040 ACKR1Q16570 336 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 ASTLQ6HA08 431 aaPredicted RBP11.08□□□□□ -0.64
UBR4-205ENST00000417040 SLC22A24Q8N4F4 322 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 L3MBTL4Q8NA19 623 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 SLC16A11Q8NCK7 471 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 UBTD2Q8WUN7 234 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 CTRCQ99895 268 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 MS4A8Q9BY19 250 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 HSFX1Q9UBD0 423 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 MOKQ9UQ07 419 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 SCGB2A1O75556 95 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 FOLR3P41439 243 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 DPY19L2P2Q6ZN68 376 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 ANKLE1Q8NAG6 615 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 OR52N1Q8NH53 320 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 ISG20Q96AZ6 181 aaKnown RBP11.08□□□□□ -0.64
UBR4-205ENST00000417040 RAB39BQ96DA2 213 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 OPALINQ96PE5 141 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 PIGMQ9H3S5 423 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 AK3Q9UIJ7 227 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 TRAV20A0A0B4J274 112 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 MCRIP1C9JLW8 97 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 GIPP09681 153 aaPredicted RBP11.08□□□□□ -0.64
UBR4-205ENST00000417040 FPR3P25089 353 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 TRHRP34981 398 aaPredicted RBP11.08□□□□□ -0.64
UBR4-205ENST00000417040 NOVP48745 357 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 CLDN20P56880 219 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 SELENBP1Q13228 472 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 ALKAL1Q6UXT8 129 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 SPACA5Q96QH8 159 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 TEAD3Q99594 435 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 SLC22A7Q9Y694 548 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 ZNF195O14628 629 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 DVL1O14640 695 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 PRAMEF4O60810 478 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 CTSAP10619 480 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 DVL1P1P54792 670 aaPredicted RBP11.08□□□□□ -0.64
UBR4-205ENST00000417040 FXNQ16595 210 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 CDKN3Q16667 212 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 HNRNPA1L2Q32P51 320 aaKnown RBP11.08□□□□□ -0.64
UBR4-205ENST00000417040 FAM199XQ6PEV8 388 aaPredicted RBP11.08□□□□□ -0.64
UBR4-205ENST00000417040 CLEC9AQ6UXN8 241 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 SLC39A5Q6ZMH5 540 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 C1orf87Q8N0U7 546 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 Q96M85 177 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 NECAP2Q9NVZ3 263 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 CHD4Q14839 1912 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 HMGN4O00479 90 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 SDCBPO00560 298 aaPredicted RBP11.08□□□□□ -0.64
UBR4-205ENST00000417040 HBE1P02100 147 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 CPN1P15169 458 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 ARRB2P32121 409 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 SUOXP51687 545 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 CORO6Q6QEF8 472 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 TOE1Q96GM8 510 aaKnown RBP11.08□□□□□ -0.64
UBR4-205ENST00000417040 REEP6Q96HR9 211 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 ARV1Q9H2C2 271 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 MYOTQ9UBF9 498 aa11.08□□□□□ -0.64
UBR4-205ENST00000417040 HPNP05981 417 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 MMP2P08253 660 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 RPS27P42677 84 aaKnown RBP11.07□□□□□ -0.64
UBR4-205ENST00000417040 EPHA5P54756 1037 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 DEFB103AP81534 67 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 MSMO1Q15800 293 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 OTUD1Q5VV17 481 aaPredicted RBP11.07□□□□□ -0.64
UBR4-205ENST00000417040 RIMKLAQ8IXN7 391 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 OR6M1Q8NGM8 313 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 FAM174AQ8TBP5 190 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 TCTN2Q96GX1 697 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 CLSTN3Q9BQT9 956 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 C1QTNF3Q9BXJ4 246 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 IGHV3-64DA0A0J9YX35 117 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 K7ESM1 405 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 PSMB3P49720 205 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 RAB38P57729 211 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 XKR7Q5GH72 579 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 ABHD17BQ5VST6 288 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 ZNF680Q8NEM1 530 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 OR1E3Q8WZA6 343 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 FAM3CQ92520 227 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 UPRTQ96BW1 309 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 TMEM38AQ9H6F2 299 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 EFSO43281 561 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 REEP5Q00765 189 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 RAB30Q15771 203 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 FAM71E1Q6IPT2 247 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 NRSN2Q9GZP1 204 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 SLCO5A1Q9H2Y9 848 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 ZNF230Q9UIE0 474 aaPredicted RBP11.07□□□□□ -0.64
UBR4-205ENST00000417040 RAB22AQ9UL26 194 aa11.07□□□□□ -0.64
UBR4-205ENST00000417040 MYH9P35579 1960 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms