RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SLC22A23A1A5C7 686 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF354AO60765 605 aaPredicted RBP9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF254O75437 659 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 ZFPL1O95159 310 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 UBL3O95164 117 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 PLGP00747 810 aaPredicted RBP9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 IGHEP01854 428 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF883P0CG24 379 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 ATF1P18846 271 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 CCR9P51686 369 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 SCAND1P57086 179 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 NANOS3P60323 173 aaKnown RBP9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 SELENBP1Q13228 472 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 SNTA1Q13424 505 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 PCOLCEQ15113 449 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 UBE2NLQ5JXB2 153 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 SLC18B1Q6NT16 456 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 KCTD18Q6PI47 426 aaPredicted RBP9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 PLET1Q6UQ28 207 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 C16orf47Q6ZP98 133 aaPredicted RBP9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 H1FNTQ75WM6 255 aaPredicted RBP9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 DPY19L4Q7Z388 723 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 DND1Q8IYX4 353 aaKnown RBP9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 THAP3Q8WTV1 239 aaPredicted RBP9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 NSMAFQ92636 917 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 RNF166Q96A37 237 aaPredicted RBP9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 SPACA9Q96E40 222 aaPredicted RBP9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 MAP6Q96JE9 813 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 FRMD6Q96NE9 622 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 DCBLD2Q96PD2 775 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 NEDD4LQ96PU5 975 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 OR8B4Q96RC9 309 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 OR11A1Q9GZK7 315 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF700Q9H0M5 742 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 METTL7AQ9H8H3 244 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 CHST11Q9NPF2 352 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 NOX4Q9NPH5 578 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 B3GAT2Q9NPZ5 323 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 MED11Q9P086 117 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 B3GALT5Q9Y2C3 310 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 KLHDC2Q9Y2U9 406 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 B3GALT1Q9Y5Z6 326 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 FREM2Q5SZK8 3169 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 ACACAQ13085 2346 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 A0A0G2JMP0 313 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 A0A0X1KG70 313 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 A0A1W2PNV4 684 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 MEIOCA2RUB1 952 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 HMX3A6NHT5 357 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 PRR32B1ATL7 298 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 B4DXG7 233 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 NPIPA5E9PKD4 350 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 AIPO00170 330 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 CTDSPLO15194 276 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 SLC16A7O60669 478 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 CCNKO75909 580 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 DKK1O94907 266 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 RPP14O95059 124 aaKnown RBP9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 HLA-DQA2P01906 255 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 ADH6P28332 368 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 PTGDSP41222 190 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 FOXL2P58012 376 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 INSM1Q01101 510 aaPredicted RBP9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 ROM1Q03395 351 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 GLO1Q04760 184 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 FOXF1Q12946 379 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 FAM69BQ5VUD6 431 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF57Q68EA5 555 aaPredicted RBP9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 LCN10Q6JVE6 187 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 LRRN1Q6UXK5 716 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 HDDC2Q7Z4H3 204 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 PIP4P1Q86T03 277 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF679Q8IYX0 411 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 OR4M2Q8NGB6 313 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 OR2G2Q8NGZ5 317 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF671Q8TAW3 534 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 M1APQ8TC57 530 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 SLC25A43Q8WUT9 341 aaPredicted RBP9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 THEM6Q8WUY1 208 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 ASB10Q8WXI3 467 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 RGP1Q92546 391 aaPredicted RBP9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 C7orf50Q9BRJ6 194 aaKnown RBP9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 THAP7Q9BT49 309 aaPredicted RBP9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 HDHD2Q9H0R4 259 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 MOV10Q9HCE1 1003 aaKnown RBP9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 GALNT9Q9HCQ5 603 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 TCF7L1Q9HCS4 588 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 BRD7Q9NPI1 651 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 FRRS1LQ9P0K9 344 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 AKAP7Q9P0M2 348 aaPredicted RBP9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 PISDQ9UG56 409 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 NPIPA1Q9UND3 350 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 CAMK2AQ9UQM7 478 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 IGHV1-45A0A0A0MS14 117 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 LINC00854A0A1B0GVQ3 168 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 FAM240BA0A1B0GVZ2 78 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 LIPT2A6NK58 231 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 OR4C45A6NMZ5 311 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 IFITM5A6NNB3 132 aa9.41□□□□□ -0.9
POLR2J3-201ENST00000379340 B4E171 279 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 236.5 ms