RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 MFSD9Q8NBP5 474 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF671Q8TAW3 534 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 WFDC12Q8WWY7 111 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HOXB13Q92826 284 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SULT4A1Q9BR01 284 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 RIOK2Q9BVS4 552 aaKnown RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 OR2AG1Q9H205 316 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CHST11Q9NPF2 352 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HAO2Q9NYQ3 351 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 GPR34Q9UPC5 381 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CAMK2AQ9UQM7 478 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 PUS1Q9Y606 427 aaKnown RBP eCLIP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 A0A087WZY1 265 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 PRR19A6NJB7 356 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 YY2O15391 372 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 ADAP1O75689 374 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 NDUFB6O95139 128 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 AHSA1O95433 338 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 IGHEP01854 428 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 PCCBP05166 539 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 IRF2P14316 349 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 COX7A2P14406 83 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 CELP19835 753 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 DTYMKP23919 212 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 NOVA1P51513 510 aaKnown RBP6.06□□□□□ -1.44
ZNF540-201ENST00000316433 RHOAP61586 193 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 SELENOTP62341 195 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 REEP5Q00765 189 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 IRF8Q02556 426 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 ZP2Q05996 745 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 MRPL49Q13405 166 aaKnown RBP6.06□□□□□ -1.44
ZNF540-201ENST00000316433 OR5I1Q13606 314 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 HERPUD1Q15011 391 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 Q5PR19 223 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 PRAMEF14Q5SWL7 426 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF697Q5TEC3 545 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 C1orf122Q6ZSJ8 110 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 ACOT7LQ6ZUV0 252 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 HIST2H3AQ71DI3 136 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 TMEM150AQ86TG1 271 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 ETFBKMTQ8IXQ9 262 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 MORN4Q8NDC4 146 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 TNFAIP8L1Q8WVP5 186 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 HPSE2Q8WWQ2 592 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 THRSPQ92748 146 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 HLA-CQ95604 372 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 IGSF21Q96ID5 467 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 CDK15Q96Q40 435 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 HIST1H2BLQ99880 126 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 HRH4Q9H3N8 390 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 SUSD2Q9UGT4 822 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 ZFP30Q9Y2G7 519 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 V9GYS6 101 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 PTPRSQ13332 1948 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 TEX13DA0A0J9YY54 714 aaPredicted RBP6.06□□□□□ -1.44
ZNF540-201ENST00000316433 TMEM272A0A1B0GTI8 110 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 C20orf202A1L168 122 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 RNF222A6NCQ9 220 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 IQCF5A8MTL0 148 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 FAM157AC9JC47 383 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 DVL2O14641 736 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 GASTP01350 101 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 IFNW1P05000 195 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 CD80P33681 288 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 DLSTP36957 453 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 RBM34P42696 430 aaKnown RBP6.06□□□□□ -1.44
ZNF540-201ENST00000316433 DGKGP49619 791 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 HMGCS1Q01581 520 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 PTSQ03393 145 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 GAS6Q14393 721 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 RAB35Q15286 201 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 RHEBQ15382 184 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 PLPP4Q5VZY2 271 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 OLFML2AQ68BL7 652 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 TTLL10Q6ZVT0 673 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 SLC36A1Q7Z2H8 476 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 FAM129CQ86XR2 697 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 GLB1L2Q8IW92 636 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 C12orf76Q8N812 135 aaPredicted RBP6.06□□□□□ -1.44
ZNF540-201ENST00000316433 PNPLA1Q8N8W4 532 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 TAAR8Q969N4 342 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 PRRC1Q96M27 445 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 YPEL4Q96NS1 127 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 SYT4Q9H2B2 425 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 SRMSQ9H3Y6 488 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 RGCCQ9H4X1 137 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.06□□□□□ -1.44
ZNF540-201ENST00000316433 GSKIPQ9P0R6 139 aa6.06□□□□□ -1.44
ZNF540-201ENST00000316433 COL5A1P20908 1838 aaPredicted RBP6.06□□□□□ -1.44
ZNF540-201ENST00000316433 LRRK1Q38SD2 2015 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 TRBV11-1A0A0K0K1C0 115 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 FAM221AA4D161 298 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 CCDC85CA6NKD9 419 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF705GA8MUZ8 300 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-201ENST00000316433 C9JQL5 133 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 CCL22O00626 93 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 PGRMC2O15173 223 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 REM1O75628 298 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 GJB3O75712 270 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 DDNO94850 711 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms