RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 KCTD18Q6PI47 426 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 FAM198BQ6UWH4 519 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 LRRC69Q6ZNQ3 347 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 ZNF679Q8IYX0 411 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 LGALS14Q8TCE9 139 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 ADAMTS14Q8WXS8 1223 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 THRSPQ92748 146 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 ATOH1Q92858 354 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 ORAI1Q96D31 301 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 ABHD1Q96SE0 405 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 AMELYQ99218 206 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 MRI1Q9BV20 369 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 ZNF700Q9H0M5 742 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 ELOVL3Q9HB03 270 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 ALKBH4Q9NXW9 302 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 RABL2AQ9UBK7 228 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 ZNF221Q9UK13 617 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 RABL2BQ9UNT1 228 aa11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 PTRH2Q9Y3E5 179 aaKnown RBP11.62□□□□□ -0.55
SPTLC1-201ENST00000262554 IGHV1-45A0A0A0MS14 117 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 SHISA8B8ZZ34 492 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 EEF1E1O43324 174 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 SLC43A1O75387 559 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 RAF1P04049 648 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 GP1BAP07359 652 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 IMPDH2P12268 514 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 SOX2P48431 317 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 HSF1Q00613 529 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 POU3F1Q03052 451 aaPredicted RBP11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 ETFDHQ16134 617 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 HES5Q5TA89 166 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 LRRN1Q6UXK5 716 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 SLC35D2Q76EJ3 337 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 KRT77Q7Z794 578 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 GPR148Q8TDV2 347 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 TRIM63Q969Q1 353 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 GFI1Q99684 422 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 SLC39A1Q9NY26 324 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 PAIP2BQ9ULR5 123 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 CAMK2AQ9UQM7 478 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 B3GALT5Q9Y2C3 310 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 COA3Q9Y2R0 106 aaPredicted RBP11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 HRH3Q9Y5N1 445 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 B3GALT1Q9Y5Z6 326 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 A0A087WV48 116 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 A0A1B0GTH9 108 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 HMX3A6NHT5 357 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 DKK1O94907 266 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 LDOC1O95751 146 aaPredicted RBP11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 UMODP07911 640 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 ZNF823P16415 610 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 CCR9P51686 369 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 ROM1Q03395 351 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 SNTA1Q13424 505 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 EIF2B1Q14232 305 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 C3orf33Q6P1S2 294 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 STAC2Q6ZMT1 411 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 ASB18Q6ZVZ8 466 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 PRSS35Q8N3Z0 413 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 OR2M3Q8NG83 312 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 OR4K17Q8NGC6 315 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 OR6F1Q8NGZ6 308 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 C4orf45Q96LM5 186 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 CMKLR1Q99788 373 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 PTGES2Q9H7Z7 377 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 NLKQ9UBE8 527 aa11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 PCDHGA9Q9Y5G4 932 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-201ENST00000262554 ARPC4-TTLL3A0A0A6YYG9 625 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 A0A1W2PNV4 684 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 GPR171O14626 319 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 LANCL1O43813 399 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 EFNA2O43921 213 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 FAM157BP0CG42 384 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 COX6A1P12074 109 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 KIR3DL2P43630 455 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 MMP15P51511 669 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 CLDN20P56880 219 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 MYBPHQ13203 477 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 LPAL2Q16609 132 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 WDR38Q5JTN6 314 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 TEX30Q5JUR7 227 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 OTPQ5XKR4 325 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 OPN5Q6U736 354 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 DTWD2Q8NBA8 298 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 OR2Y1Q8NGV0 311 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 POC1BQ8TC44 478 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 M1APQ8TC57 530 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 RNF128Q8TEB7 428 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 IMMP1LQ96LU5 166 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 FANCFQ9NPI8 374 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 AKAP7Q9P0M2 348 aaPredicted RBP11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 MRPS7Q9Y2R9 242 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 ALPK2Q86TB3 2170 aa11.6□□□□□ -0.55
SPTLC1-201ENST00000262554 TRBV5-7A0A0A0MS05 114 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 ORC5O43913 435 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 KLF7O75840 302 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 CALCBP10092 127 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 ACP1P24666 158 aa11.59□□□□□ -0.55
SPTLC1-201ENST00000262554 DPP4P27487 766 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 374.4 ms