RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 DLX5P56178 289 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 DUSP2Q05923 314 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 KCTD11Q693B1 232 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 ANKRD16Q6P6B7 361 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.18□□□□□ -0.46
COL1A1-201ENST00000225964 PLPP7Q8NBV4 271 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 FAM71CQ8NEG0 241 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 BPIFCQ8NFQ6 507 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 PTTG3PQ9NZH4 202 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 OSGIN1Q9UJX0 560 aa12.18□□□□□ -0.46
COL1A1-201ENST00000225964 APOBEC1P41238 236 aaKnown RBP12.17□□□□□ -0.46
COL1A1-201ENST00000225964 DAPP51397 102 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 SRPXP78539 464 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL1A1-201ENST00000225964 GLIPR1L1Q6UWM5 242 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF534Q76KX8 674 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 LILRA3Q8N6C8 439 aaPredicted RBP12.17□□□□□ -0.46
COL1A1-201ENST00000225964 OR1E3Q8WZA6 343 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 TMEM106AQ96A25 262 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 ARV1Q9H2C2 271 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 CPNE5Q9HCH3 593 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 IGHV3-15A0A0B4J1V0 119 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 PMS2P1A4D2B8 440 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 PIPP12273 146 aaPredicted RBP12.17□□□□□ -0.46
COL1A1-201ENST00000225964 SHC1P29353 583 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 PMPCAQ10713 525 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 DUSP6Q16828 381 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 FAM199XQ6PEV8 388 aaPredicted RBP12.17□□□□□ -0.46
COL1A1-201ENST00000225964 EXD3Q8N9H8 876 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 DEFB108BQ8NET1 73 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 C8orf44Q96CB5 159 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 CORINQ9Y5Q5 1042 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 DDX60Q8IY21 1712 aaKnown RBP12.17□□□□□ -0.46
COL1A1-201ENST00000225964 NUP98P52948 1817 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 RPS10-NUDT3A0A1W2PQS6 291 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 OIP5O43482 229 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 RPS10P46783 165 aaKnown RBP12.17□□□□□ -0.46
COL1A1-201ENST00000225964 TRILQ7L0X0 811 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 SSX9Q7RTT3 188 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 PLPP5Q8NEB5 264 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 EMC6Q9BV81 110 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 PRR14Q9BWN1 585 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 FN3KRPQ9HA64 309 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 QPCTLQ9NXS2 382 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF816-ZNF321PA0A0X1KG74 233 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 MEIOCA2RUB1 952 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 CSF3P09919 207 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 TNFSF8P32971 234 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 MAP2K6P52564 334 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 KCNJ8Q15842 424 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 OLIG3Q7RTU3 272 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF321PQ8N8H1 164 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 RGPD1P0DJD0 1748 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 C5orf49A4QMS7 147 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 GPRIN2O60269 458 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 CRYBA1P05813 215 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 DBPQ10586 325 aaPredicted RBP12.17□□□□□ -0.46
COL1A1-201ENST00000225964 DBX2Q6ZNG2 339 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 ADGRF3Q8IZF5 1079 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 C15orf54Q8N8G6 183 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 CCDC74BQ96LY2 380 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 TECTBQ96PL2 329 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 MENTQ9BUN1 341 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 PLK3Q9H4B4 646 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 CRLF2Q9HC73 371 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 FBXL2Q9UKC9 423 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 NPFFR2Q9Y5X5 522 aa12.17□□□□□ -0.46
COL1A1-201ENST00000225964 GOLGA4Q13439 2230 aaKnown RBP12.16□□□□□ -0.46
COL1A1-201ENST00000225964 A0A096LPE4 126 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 A0A1W2PPZ6 126 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 SIRPB1O00241 398 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 Q499Y3 187 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 C5P01031 1676 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 OR6C65A6NJZ3 312 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 FAM157BP0CG42 384 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 RAB5CP51148 216 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 CRMP1Q14194 572 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF77Q15935 545 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 SMN1Q16637 294 aaKnown RBP12.16□□□□□ -0.46
COL1A1-201ENST00000225964 PAQR9Q6ZVX9 377 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 KIRREL1Q96J84 757 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 ASB16Q96NS5 453 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 EMC7Q9NPA0 242 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 FAM212BQ9NTI7 297 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-201ENST00000225964 CHD2O14647 1828 aaKnown RBP12.16□□□□□ -0.46
COL1A1-201ENST00000225964 SERTM2A0A1B0GWG4 89 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 SH2D1BO14796 132 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 TAPBPO15533 448 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 TGM1P22735 817 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 CSN1S1P47710 185 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 FLI1Q01543 452 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-201ENST00000225964 NXNL2Q5VZ03 156 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 GFRALQ6UXV0 394 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 GRINAQ7Z429 371 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 ZBED3Q96IU2 234 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-201ENST00000225964 ATF6BQ99941 703 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 BANF2Q9H503 90 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 MMP17Q9ULZ9 603 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 KDM3BQ7LBC6 1761 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 LOC100289279A0A1B0GTE1 492 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms