RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 S100PP25815 95 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 GPM6BQ13491 265 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 CARD17Q5XLA6 110 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 TMEM184AQ6ZMB5 413 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 TMEM151BQ8IW70 566 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 RNF170Q96K19 258 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 CXorf58Q96LI9 332 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 LINC00615Q96LM1 132 aaPredicted RBP13.42□□□□□ -0.26
VPS36-207ENST00000611132 JSRP1Q96MG2 331 aaPredicted RBP13.42□□□□□ -0.26
VPS36-207ENST00000611132 SLC19A3Q9BZV2 496 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 MRPS18AQ9NVS2 196 aaKnown RBP13.42□□□□□ -0.26
VPS36-207ENST00000611132 CGGBP1Q9UFW8 167 aaPredicted RBP13.42□□□□□ -0.26
VPS36-207ENST00000611132 RNF215Q9Y6U7 377 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 ZNF264O43296 627 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 TLE3Q04726 772 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 MDGA2Q7Z553 956 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 GHITMQ9H3K2 345 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 PDE7BQ9NP56 450 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 EHFQ9NZC4 300 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 MBD1Q9UIS9 605 aaPredicted RBP13.42□□□□□ -0.26
VPS36-207ENST00000611132 DAPP1Q9UN19 280 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 UBE2J1Q9Y385 318 aaPredicted RBP13.42□□□□□ -0.26
VPS36-207ENST00000611132 RHBDD3Q9Y3P4 386 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 SDK1Q7Z5N4 2213 aa13.42□□□□□ -0.26
VPS36-207ENST00000611132 URB1O60287 2271 aaKnown RBP13.42□□□□□ -0.26
VPS36-207ENST00000611132 VSTM2BA6NLU5 285 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 HMSDA8MTL9 139 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 BCL2L11O43521 198 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 S100A8P05109 93 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 SERPINA5P05154 406 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 ZNF770Q6IQ21 691 aaPredicted RBP13.41□□□□□ -0.26
VPS36-207ENST00000611132 TMEM91Q6ZNR0 172 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 DCBLD2Q96PD2 775 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 TMEM231Q9H6L2 316 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 PARPBPQ9NWS1 579 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 SLC23A2Q9UGH3 650 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 A0A1W2PS29 197 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 PSMB6P28072 239 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 ZNF542PQ5EBM4 170 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 ZNF626Q68DY1 528 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 NHLRC1Q6VVB1 395 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 BAP18Q8IXM2 172 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 OR13C9Q8NGT0 318 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 SIGLEC7Q9Y286 467 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 CSAG2Q9Y5P2 127 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 PRSS38A1L453 326 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 TACR3P29371 465 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 RAB38P57729 211 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 HHEXQ03014 270 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 ELOCQ15369 112 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 KCNRGQ8N5I3 272 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 ST7LQ8TDW4 575 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 NPRL2Q8WTW4 380 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 PPP1R1CQ8WVI7 109 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 HGDQ93099 445 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 IL21Q9HBE4 155 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 MSRAQ9UJ68 235 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 RAB22AQ9UL26 194 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 TMEM225BP0DP42 221 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 CPN1P15169 458 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 DAP3P51398 398 aaKnown RBP13.41□□□□□ -0.26
VPS36-207ENST00000611132 DEFB103AP81534 67 aa13.41□□□□□ -0.26
VPS36-207ENST00000611132 EEF1A2Q05639 463 aaKnown RBP13.41□□□□□ -0.26
VPS36-207ENST00000611132 ABHD12BQ7Z5M8 362 aaPredicted RBP13.41□□□□□ -0.26
VPS36-207ENST00000611132 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.4□□□□□ -0.26
VPS36-207ENST00000611132 BET1O15155 118 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 SUSD5O60279 629 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 SLC35E2P0CK97 266 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 CPT2P23786 658 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 FXYD4P59646 89 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 RPL19P84098 196 aaKnown RBP13.4□□□□□ -0.26
VPS36-207ENST00000611132 TDGQ13569 410 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 DOC2BQ14184 412 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 RBM39Q14498 530 aaKnown RBP13.4□□□□□ -0.26
VPS36-207ENST00000611132 ADAM5Q6NVV9 412 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 TMPRSS11FQ6ZWK6 438 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 DND1Q8IYX4 353 aaKnown RBP13.4□□□□□ -0.26
VPS36-207ENST00000611132 BVESQ8NE79 360 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 OR2A1Q8NGT9 310 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 MARVELD3Q96A59 401 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 GMEB2Q9UKD1 530 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 KLF8O95600 359 aaPredicted RBP13.4□□□□□ -0.26
VPS36-207ENST00000611132 AFF3P51826 1226 aaKnown RBP13.4□□□□□ -0.26
VPS36-207ENST00000611132 LSM11P83369 360 aaKnown RBP eCLIP13.4□□□□□ -0.26
VPS36-207ENST00000611132 MPEG1Q2M385 716 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 C2orf76Q3KRA6 126 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 UQCC3Q6UW78 93 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 TTLL10Q6ZVT0 673 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 KCNJ15Q99712 375 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 EMC9Q9Y3B6 208 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 B3GALT1Q9Y5Z6 326 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 KPTNQ9Y664 436 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 TCRBV16S1A1N1A0A5B0 115 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 TSTD3H0UI37 97 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 GABRA1P14867 456 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 NTSR1P30989 418 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 ARRB1P49407 418 aaPredicted RBP13.4□□□□□ -0.26
VPS36-207ENST00000611132 FCRL6Q6DN72 434 aa13.4□□□□□ -0.26
VPS36-207ENST00000611132 FRMD1Q8N878 549 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms