RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 GAAP10253 952 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 ZNF250P15622 560 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 TCN1P20061 433 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 ALDH3B1P43353 468 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 SEC24CP53992 1094 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 PCBP3P57721 371 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 ZNF74Q16587 644 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 NKPD1Q17RQ9 610 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 MSMPQ1L6U9 139 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 RUNDC3AQ59EK9 446 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 ACSM5Q6NUN0 579 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 TMEM154Q6P9G4 183 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 RINLQ6ZS11 566 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 PATL1Q86TB9 770 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 COMTD1Q86VU5 262 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 SLC30A7Q8NEW0 376 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 SYNPRQ8TBG9 265 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 LRRC8CQ8TDW0 803 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 STON2Q8WXE9 905 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 ZMYND19Q96E35 227 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 ARHGDIGQ99819 225 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 PLA2G12AQ9BZM1 189 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 METTL17Q9H7H0 456 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 CDH20Q9HBT6 801 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 HINT3Q9NQE9 182 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 ZNF275Q9NSD4 429 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 TMEM38BQ9NVV0 291 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 TAS2R5Q9NYW4 299 aa15.27■□□□□ 0.04
SHKBP1-227ENST00000602011 IGLV3-9A0A075B6K5 115 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 IQCMA0A1B0GVH7 501 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 C17orf100A8MU93 164 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 M0QX08 132 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 RNF13O43567 381 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 BCL10O95999 233 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 COMPP49747 757 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 KLF3P57682 345 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 TBC1D28Q2M2D7 210 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 AGKQ53H12 422 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 INTS11Q5TA45 600 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 LRFN4Q6PJG9 635 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 LRP11Q86VZ4 500 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 TSPEARQ8WU66 669 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 RAB39BQ96DA2 213 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 LRRC37BQ96QE4 947 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 KCNN2Q9H2S1 579 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 RNF121Q9H920 327 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 TAAR3PQ9P1P4 343 aa15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 LEF1Q9UJU2 399 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-227ENST00000602011 TRAPPC13A5PLN9 417 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 C11orf98E9PRG8 122 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 SERPINI2O75830 405 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 IGHG1P01857 330 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 GATA3P23771 443 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 AQP1P29972 269 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 CRYBB2P43320 205 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 ZNF84P51523 738 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 UCP2P55851 309 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 LMO4P61968 165 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 NPTX1Q15818 432 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 DUSP7Q16829 419 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 ENTPD8Q5MY95 495 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 DLEU7Q6UYE1 221 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 WDR88Q6ZMY6 472 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 ZNF584Q8IVC4 421 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 C10orf111Q8N326 155 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 DPP10Q8N608 796 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 PCDHAC1Q9H158 963 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 TREM2Q9NZC2 230 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 NDUFAF1Q9Y375 327 aa15.25■□□□□ 0.03
SHKBP1-227ENST00000602011 LRRN3E7EW58 273 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 TRIM77I1YAP6 450 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 J3QLI3 93 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 RP2O75695 350 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 CH25HO95992 272 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 PNPP00491 289 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 IGF2P01344 180 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 QDPRP09417 244 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 NAT2P11245 290 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 NR2C1P13056 603 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 CFPP27918 469 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 LIMS1P48059 325 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 HIST3H3Q16695 136 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 CYP51A1Q16850 503 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 FAHD2BQ6P2I3 314 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 SLC16A14Q7RTX9 510 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 SMYD1Q8NB12 490 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 OR6T1Q8NGN1 323 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 ADAMTS16Q8TE57 1224 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 FAM216AQ8WUB2 273 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 YIPF5Q969M3 257 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 FAHD2AQ96GK7 314 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 TIMD4Q96H15 378 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 CPPED1Q9BRF8 314 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 ZNF426Q9BUY5 554 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 POLR2J2Q9GZM3 115 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 POLR2J3Q9H1A7 115 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 IKZF5Q9H5V7 419 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 DECR2Q9NUI1 292 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 PCDHB10Q9UN67 800 aa15.24■□□□□ 0.03
SHKBP1-227ENST00000602011 A0A1W2PRG6 482 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms