RNA–Protein interactions for RNA: ENST00000590247.6

PDCD5-207, Transcript of programmed cell death 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD5, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-207ENST00000590247 A4GNTQ9UNA3 340 aa16.63■□□□□ 0.25
PDCD5-207ENST00000590247 SPEF1Q9Y4P9 236 aa16.63■□□□□ 0.25
PDCD5-207ENST00000590247 VWC2LB2RUY7 222 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 SHOX2O60902 331 aaPredicted RBP16.62■□□□□ 0.25
PDCD5-207ENST00000590247 FARS2O95363 451 aaKnown RBP16.62■□□□□ 0.25
PDCD5-207ENST00000590247 RAB36O95755 333 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 THBS4P35443 961 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 EVX1P49640 407 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 ZNF133P52736 654 aaPredicted RBP16.62■□□□□ 0.25
PDCD5-207ENST00000590247 SNTB2Q13425 540 aaKnown RBP16.62■□□□□ 0.25
PDCD5-207ENST00000590247 MELKQ14680 651 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 TAF11Q15544 211 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 ANKDD1AQ495B1 522 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 VHLLQ6RSH7 139 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 OFCC1Q8IZS5 231 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 PFN4Q8NHR9 129 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 ASB10Q8WXI3 467 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 DOK1Q99704 481 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 RAB1BQ9H0U4 201 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 INIPQ9NRY2 104 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 HIF3AQ9Y2N7 669 aa16.62■□□□□ 0.25
PDCD5-207ENST00000590247 SVEP1Q4LDE5 3571 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 CXCR6O00574 342 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 NME4O00746 187 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 IFNW1P05000 195 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 QDPRP09417 244 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 NR2C1P13056 603 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 GIPRP48546 466 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 PTDSS1P48651 473 aaKnown RBP16.61■□□□□ 0.25
PDCD5-207ENST00000590247 PDLIM4P50479 330 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 SLC7A2P52569 658 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 CLRN1P58418 232 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 PIGFQ07326 219 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 CBLL1Q75N03 491 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 SPATA21Q7Z572 469 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 TREML1Q86YW5 311 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 SKA3Q8IX90 412 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 NOXO1Q8NFA2 376 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 GEMIN6Q8WXD5 167 aaKnown RBP16.61■□□□□ 0.25
PDCD5-207ENST00000590247 CMTM5Q96DZ9 223 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 SMURF2Q9HAU4 748 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 ABCD2Q9UBJ2 740 aa16.61■□□□□ 0.25
PDCD5-207ENST00000590247 LOC390937A0A1W2PQ73 354 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 MCIDASD6RGH6 385 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 hCG_2039718K7EN88 272 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 SERPINA5P05154 406 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 F13BP05160 661 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 ERCC1P07992 297 aaPredicted RBP16.6■□□□□ 0.25
PDCD5-207ENST00000590247 ACADSP16219 412 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 GLRXP35754 106 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 AQP2P41181 271 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 ZNF84P51523 738 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 RPS23P62266 143 aaKnown RBP16.6■□□□□ 0.25
PDCD5-207ENST00000590247 C10orf128Q5T292 105 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 ARMC4Q5T2S8 1044 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 RNF113BQ8IZP6 322 aaKnown RBP16.6■□□□□ 0.25
PDCD5-207ENST00000590247 SPATA3Q8NHX4 192 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 NEU4Q8WWR8 484 aaPredicted RBP16.6■□□□□ 0.25
PDCD5-207ENST00000590247 MCHR2Q969V1 340 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 BPIFA2Q96DR5 249 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 MS4A3Q96HJ5 214 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 VRK1Q99986 396 aaPredicted RBP16.6■□□□□ 0.25
PDCD5-207ENST00000590247 MYLK2Q9H1R3 596 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 C1orf198Q9H425 327 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 CMAHPQ9Y471 501 aa16.6■□□□□ 0.25
PDCD5-207ENST00000590247 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.6■□□□□ 0.255e-8■■■■□ 21.1
PDCD5-207ENST00000590247 TMEM129A0AVI4 362 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 GMNCA6NCL1 334 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 GSTA4O15217 222 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 IGHV4-31P0DP07 118 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 USF1P22415 310 aaPredicted RBP16.59■□□□□ 0.25
PDCD5-207ENST00000590247 PRDX6P30041 224 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 LSP1P33241 339 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 GSK3BP49841 420 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 NUDT2P50583 147 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 GALK2Q01415 458 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 TRAM2Q15035 370 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 CHRFAM7AQ494W8 412 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 SLC36A2Q495M3 483 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 IFI44LQ53G44 452 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 KRT80Q6KB66 452 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 ZNF540Q8NDQ6 660 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 FNDC8Q8TC99 324 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 MRPL24Q96A35 216 aaKnown RBP16.59■□□□□ 0.25
PDCD5-207ENST00000590247 PIMREGQ9BSJ6 248 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 FNDC11Q9BVV2 318 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 TXNIPQ9H3M7 391 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 TMEM160Q9NX00 188 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 SLC7A8Q9UHI5 535 aa16.59■□□□□ 0.25
PDCD5-207ENST00000590247 TRMUO75648 421 aaKnown RBP16.58■□□□□ 0.24
PDCD5-207ENST00000590247 PTHP01270 115 aa16.58■□□□□ 0.24
PDCD5-207ENST00000590247 IGHMP01871 453 aa16.58■□□□□ 0.24
PDCD5-207ENST00000590247 PRKCDQ05655 676 aa16.58■□□□□ 0.24
PDCD5-207ENST00000590247 RUNX1T1Q06455 604 aa16.58■□□□□ 0.24
PDCD5-207ENST00000590247 FXNQ16595 210 aa16.58■□□□□ 0.24
PDCD5-207ENST00000590247 ALG10Q5BKT4 473 aa16.58■□□□□ 0.24
PDCD5-207ENST00000590247 FAM205BPQ63HN1 556 aa16.58■□□□□ 0.24
PDCD5-207ENST00000590247 CYB5R2Q6BCY4 276 aa16.58■□□□□ 0.24
PDCD5-207ENST00000590247 TMEM53Q6P2H8 277 aa16.58■□□□□ 0.24
PDCD5-207ENST00000590247 PODNL1Q6PEZ8 512 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms