RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ITGA5P08648 1049 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 MPGP29372 298 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 GRPRP30550 384 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 SELENOPP49908 381 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 ZNF83P51522 516 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 FOXG1P55316 489 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-225ENST00000569245 ADAM8P78325 824 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 ADARB1P78563 741 aaKnown RBP12.71□□□□□ -0.37
COMMD4-225ENST00000569245 LTBQ06643 244 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 NPRL3Q12980 569 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 GABRA6Q16445 453 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 ZIK1Q3SY52 487 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-225ENST00000569245 ANKDD1AQ495B1 522 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 H1FNTQ75WM6 255 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-225ENST00000569245 ABHD12BQ7Z5M8 362 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-225ENST00000569245 MEX3DQ86XN8 651 aaKnown RBP12.71□□□□□ -0.37
COMMD4-225ENST00000569245 DHRSXQ8N5I4 330 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 ZNF417Q8TAU3 575 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 TMEM171Q8WVE6 324 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 PERPQ96FX8 193 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 MUS81Q96NY9 551 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 ZNF587Q96SQ5 575 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-225ENST00000569245 C1QTNF6Q9BXI9 259 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 ASPNQ9BXN1 380 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 GRIP2Q9C0E4 1043 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 FKRPQ9H9S5 495 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 SEC14L4Q9UDX3 406 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 B3GALT5Q9Y2C3 310 aa12.71□□□□□ -0.37
COMMD4-225ENST00000569245 OR6C65A6NJZ3 312 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 ZNF587BE7ETH6 402 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 CH25HO95992 272 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 ASAH2BP0C7U1 165 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 SAGP10523 405 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-225ENST00000569245 FUT1P19526 365 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 CAPGP40121 348 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 CRISP1P54107 249 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 CLDN17P56750 224 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 MFSD13AQ14CX5 517 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 SLC36A3Q495N2 470 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 TTC23Q5W5X9 447 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 RPL13AP3Q6NVV1 102 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 ADAM5Q6NVV9 412 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 KLHL24Q6TFL4 600 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 TMEM108Q6UXF1 575 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 ZNF611Q8N823 705 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 NEUROG1Q92886 237 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 OXGR1Q96P68 337 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 RIBC2Q9H4K1 309 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 NANSQ9NR45 359 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 FAM118AQ9NWS6 357 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 IL20Q9NYY1 176 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 ZNF229Q9UJW7 825 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 CDH10Q9Y6N8 788 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 FREM1Q5H8C1 2179 aa12.7□□□□□ -0.38
COMMD4-225ENST00000569245 LOC100130705A0A1B0GUX0 176 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 M0R1B8 84 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 ABCD4O14678 606 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 TSPAN19P0C672 248 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 POLR2IP36954 125 aaKnown RBP12.69□□□□□ -0.38
COMMD4-225ENST00000569245 RPS4XP62701 263 aaKnown RBP12.69□□□□□ -0.38
COMMD4-225ENST00000569245 LGALS3BPQ08380 585 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 PMS2P3Q13401 168 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 FHL1Q13642 323 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 SHEQ5VZ18 495 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 SEZ6L2Q6UXD5 910 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 ZNF620Q6ZNG0 422 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 OAFQ86UD1 273 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 UEVLDQ8IX04 471 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 PIAS4Q8N2W9 510 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-225ENST00000569245 ZNF555Q8NEP9 628 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 C1orf162Q8NEQ5 155 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-225ENST00000569245 WFDC11Q8NEX6 87 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 KBTBD8Q8NFY9 601 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 FBXW5Q969U6 566 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 MOGAT1Q96PD6 335 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 ALKBH3Q96Q83 286 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-225ENST00000569245 PITX2Q99697 317 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 TMUB1Q9BVT8 246 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 CXorf56Q9H5V9 222 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 NPAP1Q9NZP6 1156 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 POU2F3Q9UKI9 436 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 LAMP3Q9UQV4 416 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 SIGLEC7Q9Y286 467 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 CORINQ9Y5Q5 1042 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 SLC25A15Q9Y619 301 aa12.69□□□□□ -0.38
COMMD4-225ENST00000569245 LRRN3E7EW58 273 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 H3BN98 237 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 DENRO43583 198 aaKnown RBP12.68□□□□□ -0.38
COMMD4-225ENST00000569245 AKAP8O43823 692 aaKnown RBP12.68□□□□□ -0.38
COMMD4-225ENST00000569245 SLC43A1O75387 559 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 UPK3AO75631 287 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 OR6A2O95222 327 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 SOX14O95416 240 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 AHCYP23526 432 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 EPHA2P29317 976 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 RPS6KA3P51812 740 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 FXYD6P3P58550 94 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 PRPS1P60891 318 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 IL18R1Q13478 541 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 PTGES3Q15185 160 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms