RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 HAVCR2Q8TDQ0 301 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 FGF13Q92913 245 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 URM1Q9BTM9 101 aaKnown RBP9.63□□□□□ -0.87
USB1-212ENST00000566082 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.63□□□□□ -0.87
USB1-212ENST00000566082 PIGMQ9H3S5 423 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 C12orf10Q9HB07 376 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 OR5V1Q9UGF6 321 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 FBXO4Q9UKT5 387 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 LOC100289279A0A1B0GTE1 492 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 ZNF726A6NNF4 738 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 SUSD5O60279 629 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 OR4E1P0C645 316 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 NR0B1P51843 470 aaKnown RBP9.63□□□□□ -0.87
USB1-212ENST00000566082 CSNK2A1P68400 391 aaPredicted RBP9.63□□□□□ -0.87
USB1-212ENST00000566082 HHEXQ03014 270 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 FAM122BQ7Z309 247 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 CMIPQ8IY22 773 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 CSNK2A3Q8NEV1 391 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 MRGPRX3Q96LB0 322 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 KCNJ15Q99712 375 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 MCOLN1Q9GZU1 580 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 CA10Q9NS85 328 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 EMC9Q9Y3B6 208 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 TMEM229AB2RXF0 380 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 CAMLGP49069 296 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 EMDP50402 254 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 EMP2P54851 167 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 RAB2AP61019 212 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 PDZK1IP1Q13113 114 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 C2orf76Q3KRA6 126 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 DMKNQ6E0U4 476 aaPredicted RBP9.63□□□□□ -0.87
USB1-212ENST00000566082 TMEM184AQ6ZMB5 413 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 TMPRSS11FQ6ZWK6 438 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 OR13C9Q8NGT0 318 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 TGM7Q96PF1 710 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 CRB3Q9BUF7 120 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 LRIT1Q9P2V4 623 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 MOKQ9UQ07 419 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 SLC22A13Q9Y226 551 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 TRPM6Q9BX84 2022 aa9.63□□□□□ -0.87
USB1-212ENST00000566082 TSPAN11A1L157 253 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 CRTAPO75718 401 aaPredicted RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 MPC2O95563 127 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 RBM39Q14498 530 aaKnown RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 SLC22A6Q4U2R8 563 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 FAM78AQ5JUQ0 283 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 SLC35D3Q5M8T2 416 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 KDM8Q8N371 416 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 ARIH2OSQ8N7S6 290 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 OR4N2Q8NGD1 307 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 ZNF296Q8WUU4 475 aaPredicted RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 TOMM40LQ969M1 308 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 CDC6Q99741 560 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 PRMT8Q9NR22 394 aaPredicted RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 C2orf42Q9NWW7 574 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 ZNF629Q9UEG4 869 aaPredicted RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 BORCS7-ASMTA0A0B4J1R7 106 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 OR2W5A6NFC9 320 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 SSX5O60225 188 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 STK17BO94768 372 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 BLKP51451 505 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 CCINQ13939 588 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 PLEKHN1Q494U1 663 aaPredicted RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 PDSS1Q5T2R2 415 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 LINC00346Q8IVM7 164 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 DND1Q8IYX4 353 aaKnown RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 RNF141Q8WVD5 230 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 PPP1R1CQ8WVI7 109 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 PATE1Q8WXA2 126 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 ZNF578Q96N58 590 aaPredicted RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 PARP12Q9H0J9 701 aaKnown RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 UBQLN4Q9NRR5 601 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 KLRF1Q9NZS2 232 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 SCML1Q9UN30 329 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 PLXNB2O15031 1838 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 CENPVL1A0A0U1RR11 272 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 LOC105371267A0A1B0GV96 52 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 H3BML4 177 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 TLX3O43711 291 aaPredicted RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 ATG12O94817 140 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 HLA-DQB1P01920 261 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 NTSR1P30989 418 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 GJA4P35212 333 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 CLDN6P56747 220 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 ACSM1Q08AH1 577 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 EBPQ15125 230 aaKnown RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 AVPI1Q5T686 147 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 PAPD4Q6PIY7 484 aaKnown RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 TMEM151BQ8IW70 566 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 DEFB119Q8N690 84 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 ESX1Q8N693 406 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 OR4K17Q8NGC6 315 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 OR6N1Q8NGY5 312 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 CCL4L1Q8NHW4 92 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 SLC25A32Q9H2D1 315 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 ZNF346Q9UL40 294 aaKnown RBP9.62□□□□□ -0.87
USB1-212ENST00000566082 FOXJ3Q9UPW0 622 aa9.62□□□□□ -0.87
USB1-212ENST00000566082 ZNF264O43296 627 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 IL5P05113 134 aa9.61□□□□□ -0.87
USB1-212ENST00000566082 VAMP2P63027 116 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms