RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 RNF13O43567 381 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 SNAP29O95721 258 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 NPPAP01160 153 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 VIMP08670 466 aaKnown RBP14.37□□□□□ -0.11
CCNF-203ENST00000564236 IL2RGP31785 369 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 RBM34P42696 430 aaKnown RBP14.37□□□□□ -0.11
CCNF-203ENST00000564236 CDH15P55291 814 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 CR1LQ2VPA4 569 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 REP15Q6BDI9 236 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 NANOGP8Q6NSW7 305 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 LINC01356Q8N9X3 169 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 OR8J3Q8NGG0 315 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 FGFBP3Q8TAT2 258 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 SH3GL1Q99961 368 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 RACGAP1Q9H0H5 632 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 C1orf198Q9H425 327 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 NANOGQ9H9S0 305 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 NPHS2Q9NP85 383 aa14.37□□□□□ -0.11
CCNF-203ENST00000564236 IGLV3-9A0A075B6K5 115 aa14.36□□□□□ -0.11
CCNF-203ENST00000564236 SERPINI2O75830 405 aa14.36□□□□□ -0.11
CCNF-203ENST00000564236 IGHG1P01857 330 aa14.36□□□□□ -0.11
CCNF-203ENST00000564236 MT-ND1P03886 318 aa14.36□□□□□ -0.11
CCNF-203ENST00000564236 ACHEP22303 614 aa14.36□□□□□ -0.11
CCNF-203ENST00000564236 APEX1P27695 318 aaKnown RBP14.36□□□□□ -0.11
CCNF-203ENST00000564236 GALK2Q01415 458 aa14.36□□□□□ -0.11
CCNF-203ENST00000564236 CYLC2Q14093 348 aaPredicted RBP14.36□□□□□ -0.11
CCNF-203ENST00000564236 RAB39AQ14964 217 aa14.36□□□□□ -0.11
CCNF-203ENST00000564236 HDXQ7Z353 690 aa14.36□□□□□ -0.11
CCNF-203ENST00000564236 VANGL1Q8TAA9 524 aaPredicted RBP14.36□□□□□ -0.11
CCNF-203ENST00000564236 TPK1Q9H3S4 243 aa14.36□□□□□ -0.11
CCNF-203ENST00000564236 OR5F1O95221 314 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 FARS2O95363 451 aaKnown RBP14.35□□□□□ -0.11
CCNF-203ENST00000564236 BCL10O95999 233 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 HIST1H2ABP04908 130 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 THRBP10828 461 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 ZNF250P15622 560 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 DVL1P1P54792 670 aaPredicted RBP14.35□□□□□ -0.11
CCNF-203ENST00000564236 MELKQ14680 651 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 TRIP10Q15642 601 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 C10orf128Q5T292 105 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 GKAP1Q5VSY0 366 aaPredicted RBP14.35□□□□□ -0.11
CCNF-203ENST00000564236 IL17RELQ6ZVW7 336 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 HIST3H2AQ7L7L0 130 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 HDDC2Q7Z4H3 204 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 LRP11Q86VZ4 500 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 SLC26A7Q8TE54 656 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 RDH5Q92781 318 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 HIST1H2ACQ93077 130 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 THOC1Q96FV9 657 aaKnown RBP14.35□□□□□ -0.11
CCNF-203ENST00000564236 SNX18Q96RF0 628 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 SYT3Q9BQG1 590 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 MYEF2Q9P2K5 600 aaKnown RBP14.35□□□□□ -0.11
CCNF-203ENST00000564236 BAG5Q9UL15 447 aa14.35□□□□□ -0.11
CCNF-203ENST00000564236 ZNF346Q9UL40 294 aaKnown RBP14.35□□□□□ -0.11
CCNF-203ENST00000564236 A0A0G2JND7 137 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 HTR3EA5X5Y0 456 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 BBIP1A8MTZ0 92 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 KPNA4O00629 521 aaPredicted RBP14.34□□□□□ -0.11
CCNF-203ENST00000564236 PTHP01270 115 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 HPXP02790 462 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 QDPRP09417 244 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 PATE4P0C8F1 98 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 LSP1P33241 339 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 ALDH3B1P43353 468 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 UGT2B15P54855 530 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 TMEM33P57088 247 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 RUNX1T1Q06455 604 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 RPL18Q07020 188 aaKnown RBP14.34□□□□□ -0.11
CCNF-203ENST00000564236 MMEL1Q495T6 779 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 RABL3Q5HYI8 236 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 ERICH5Q6P6B1 374 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 NANOGNBQ7Z5D8 188 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 CARM1Q86X55 608 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 SLC30A7Q8NEW0 376 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 NOXO1Q8NFA2 376 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 ASB10Q8WXI3 467 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 MCHR2Q969V1 340 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 LRRC58Q96CX6 371 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 NMD3Q96D46 503 aaKnown RBP14.34□□□□□ -0.11
CCNF-203ENST00000564236 SMURF2Q9HAU4 748 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 NKIRAS2Q9NYR9 191 aa14.34□□□□□ -0.11
CCNF-203ENST00000564236 STX18Q9P2W9 335 aaKnown RBP14.34□□□□□ -0.11
CCNF-203ENST00000564236 B4DSR2 109 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 LYNX1G3V0Z9 82 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 RP2O75695 350 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 OR7A10O76100 309 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 MMP7P09237 267 aaPredicted RBP14.33□□□□□ -0.12
CCNF-203ENST00000564236 LYNX1P0DP58 116 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 H2AFXP16104 143 aaPredicted RBP14.33□□□□□ -0.12
CCNF-203ENST00000564236 PCMT1P22061 227 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 DAP3P51398 398 aaKnown RBP14.33□□□□□ -0.12
CCNF-203ENST00000564236 SEC24CP53992 1094 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 SLC36A2Q495M3 483 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 ARMC4Q5T2S8 1044 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 TMEM53Q6P2H8 277 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 DEF8Q6ZN54 512 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 NKAIN4Q8IVV8 208 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 PAQR4Q8N4S7 273 aaPredicted RBP14.33□□□□□ -0.12
CCNF-203ENST00000564236 RFLNBQ8N5W9 214 aa14.33□□□□□ -0.12
CCNF-203ENST00000564236 OR4K5Q8NGD3 323 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms