RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SLC25A30Q5SVS4 291 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 JAZF1Q86VZ6 243 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 MCEMP1Q8IX19 187 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 SLC37A3Q8NCC5 494 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 ST6GALNAC3Q8NDV1 305 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 OR4K13Q8NH42 304 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 UBE2FQ969M7 185 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 TMEM45BQ96B21 275 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 ZNF385AQ96PM9 386 aaKnown RBP11.47□□□□□ -0.57
SPG7-209ENST00000564047 DDOQ99489 341 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 SH3GL3Q99963 347 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 TP63Q9H3D4 680 aaPredicted RBP11.47□□□□□ -0.57
SPG7-209ENST00000564047 RCE1Q9Y256 329 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 TPRKBQ9Y3C4 175 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 SNX5Q9Y5X3 404 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 FREM3P0C091 2139 aa11.47□□□□□ -0.57
SPG7-209ENST00000564047 SLC35F4A4IF30 521 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 MBD3L4A6NDZ8 208 aaPredicted RBP11.46□□□□□ -0.57
SPG7-209ENST00000564047 MBD3L3A6NE82 208 aaPredicted RBP11.46□□□□□ -0.57
SPG7-209ENST00000564047 MBD3L5A6NJ08 208 aaPredicted RBP11.46□□□□□ -0.57
SPG7-209ENST00000564047 ZNF726A6NNF4 738 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 M0R129 80 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 M0R3G1 203 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 ARHGEF9O43307 516 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 SLC19A2O60779 497 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 NOL3O60936 208 aaKnown RBP11.46□□□□□ -0.57
SPG7-209ENST00000564047 YES1P07947 543 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 PAICSP22234 425 aaKnown RBP11.46□□□□□ -0.57
SPG7-209ENST00000564047 ACVR2AP27037 513 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 CDKN2AP42771 156 aaKnown RBP11.46□□□□□ -0.57
SPG7-209ENST00000564047 CLDN17P56750 224 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 ITGADQ13349 1161 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 CRMP1Q14194 572 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 TMEM201Q5SNT2 666 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 C1orf185Q5T7R7 199 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 MEDAGQ5VYS4 303 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 OR2A2Q6IF42 318 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 LAIR2Q6ISS4 152 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 LEG1Q6P5S2 330 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 PLXDC2Q6UX71 529 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 RPTNQ6XPR3 784 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 SPARTQ8N0X7 666 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 NPEPL1Q8NDH3 523 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 SDR9C7Q8NEX9 313 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 MBD3L2Q8NHZ7 208 aaPredicted RBP11.46□□□□□ -0.57
SPG7-209ENST00000564047 C12orf43Q96C57 262 aaKnown RBP11.46□□□□□ -0.57
SPG7-209ENST00000564047 SLC25A44Q96H78 314 aaPredicted RBP11.46□□□□□ -0.57
SPG7-209ENST00000564047 GMPPAQ96IJ6 420 aaPredicted RBP11.46□□□□□ -0.57
SPG7-209ENST00000564047 IL4I1Q96RQ9 567 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 NMNAT3Q96T66 252 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 TM9SF2Q99805 663 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 BCL7BQ9BQE9 202 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 EMC6Q9BV81 110 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 CCNB1IP1Q9NPC3 277 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 RASSF1Q9NS23 344 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 GPR52Q9Y2T5 361 aa11.46□□□□□ -0.57
SPG7-209ENST00000564047 MED12Q93074 2177 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 MPDZO75970 2070 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 PRSS37A4D1T9 235 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 KDM4EB2RXH2 506 aaPredicted RBP11.45□□□□□ -0.58
SPG7-209ENST00000564047 PRR23D1E9PI22 279 aaPredicted RBP11.45□□□□□ -0.58
SPG7-209ENST00000564047 SS18L1O75177 396 aaPredicted RBP11.45□□□□□ -0.58
SPG7-209ENST00000564047 ZNF432O94892 652 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 AGFG2O95081 481 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 RENP00797 406 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 IGHG1P01857 330 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 PGA4P0DJD7 388 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 PGA3P0DJD8 388 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 PRR23D2P0DMB1 279 aaPredicted RBP11.45□□□□□ -0.58
SPG7-209ENST00000564047 PCSK6P29122 969 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 SLC25A1P53007 311 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 RUNX1T1Q06455 604 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 OCLNQ16625 522 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 AADACL4Q5VUY2 407 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 XAF1Q6GPH4 301 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 RTL6Q6ICC9 239 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 CXXC5Q7LFL8 322 aaKnown RBP11.45□□□□□ -0.58
SPG7-209ENST00000564047 AAED1Q7RTV5 226 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 DOLPP1Q86YN1 238 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 CPOQ8IVL8 374 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 TUSC5Q8IXB3 177 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 FNDC8Q8TC99 324 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 APH1BQ8WW43 257 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 IPCEF1Q8WWN9 437 aaPredicted RBP11.45□□□□□ -0.58
SPG7-209ENST00000564047 MUL1Q969V5 352 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 LRR1Q96L50 414 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 Q96MT0 163 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 OR2M2Q96R28 347 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 ALG12Q9BV10 488 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 MRPL13Q9BYD1 178 aaKnown RBP11.45□□□□□ -0.58
SPG7-209ENST00000564047 NMNAT2Q9BZQ4 307 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 HINT3Q9NQE9 182 aaKnown RBP11.45□□□□□ -0.58
SPG7-209ENST00000564047 PARPBPQ9NWS1 579 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 CLN6Q9NWW5 311 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 SCN3BQ9NY72 215 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 VSX1Q9NZR4 365 aaPredicted RBP11.45□□□□□ -0.58
SPG7-209ENST00000564047 NOSIPQ9Y314 301 aaKnown RBP11.45□□□□□ -0.58
SPG7-209ENST00000564047 FAM215AQ9Y5M1 114 aa11.45□□□□□ -0.58
SPG7-209ENST00000564047 ITPR3Q14573 2671 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms