RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 NIPA1Q7RTP0 329 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 LINC01551Q86U37 167 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 FAM228AQ86W67 206 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 STPG2Q8N412 459 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 OR1S2Q8NGQ3 325 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 KCNG3Q8TAE7 436 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 ZNF596Q8TC21 504 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 GEMIN6Q8WXD5 167 aaKnown RBP3.43□□□□□ -1.86
LINC00557-201ENST00000563184 SMIM10Q96HG1 83 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 WFIKKN1Q96NZ8 548 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 OSBPL10Q9BXB5 764 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 SLC17A9Q9BYT1 436 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 TPK1Q9H3S4 243 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 ETNK2Q9NVF9 386 aa3.43□□□□□ -1.86
LINC00557-201ENST00000563184 C6orf47O95873 294 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 FGGP02679 453 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 EBI3Q14213 229 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 TGFBIQ15582 683 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 SSX2Q16385 188 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 TMEM135Q86UB9 458 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 CDH26Q8IXH8 852 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 Q8N976 141 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 SLC2A14Q8TDB8 520 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 STMN2Q93045 179 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 TCHPQ9BT92 498 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 SLC2A8Q9NY64 477 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 TBX21Q9UL17 535 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 STARD10Q9Y365 291 aa3.42□□□□□ -1.86
LINC00557-201ENST00000563184 IGLV4-69A0A075B6H9 119 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 IGLV11-55A0A075B6I3 123 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 UTS2O95399 124 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 ZDHHC11BP0C7U3 371 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 MAGP20916 626 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 OMGP23515 440 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 IFNA8P32881 189 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 SERPINB5P36952 375 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 CDKN1BP46527 198 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 ATP5IP56385 69 aaPredicted RBP3.41□□□□□ -1.86
LINC00557-201ENST00000563184 HERVK_113P61574 105 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 SLC7A9P82251 487 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 MRPS22P82650 360 aaKnown RBP3.41□□□□□ -1.86
LINC00557-201ENST00000563184 EIF4EBP2Q13542 120 aaPredicted RBP3.41□□□□□ -1.86
LINC00557-201ENST00000563184 TFDP3Q5H9I0 405 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 ZNF691Q5VV52 312 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 OR52W1Q6IF63 320 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 TMEM107Q6UX40 140 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 ZYG11AQ6WRX3 759 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 ZNF836Q6ZNA1 936 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 H2AFVQ71UI9 128 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 CEP112Q8N8E3 955 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 TPD52L3Q96J77 140 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 TSSK3Q96PN8 268 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 SH3GL3Q99963 347 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 PKIBQ9C010 78 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 TM9SF3Q9HD45 589 aa3.41□□□□□ -1.86
LINC00557-201ENST00000563184 CNTNAP1P78357 1384 aa3.4□□□□□ -1.86
LINC00557-201ENST00000563184 ZNF716A6NP11 495 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 UBXN8O00124 270 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 ZNF735P0CB33 412 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 RPS2P15880 293 aaKnown RBP3.4□□□□□ -1.87
LINC00557-201ENST00000563184 PON3Q15166 354 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 SASS6Q6UVJ0 657 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 TAS2R42Q7RTR8 314 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 NANOGNBQ7Z5D8 188 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 PCP2Q8IVA1 136 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 B3GNT7Q8NFL0 401 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 ZFP90Q8TF47 636 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 RPF2Q9H7B2 306 aaKnown RBP3.4□□□□□ -1.87
LINC00557-201ENST00000563184 LHX9Q9NQ69 397 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 PSMC3IPQ9P2W1 217 aaPredicted RBP3.4□□□□□ -1.87
LINC00557-201ENST00000563184 LSM7Q9UK45 103 aaKnown RBP3.4□□□□□ -1.87
LINC00557-201ENST00000563184 KIAA1257Q9ULG3 409 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 IKBKGQ9Y6K9 419 aa3.4□□□□□ -1.87
LINC00557-201ENST00000563184 TRAV39A0A0B4J263 110 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 A0A0B4J2A0 478 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 CIB4A0PJX0 185 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 HIDE1A8MVS5 230 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 SPECC1L-ADORA2AF8WAN1 911 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 PPP1R2P9O14990 202 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 TSPAN13O95857 204 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 IGKV3-11P04433 115 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 TLX1NBP0CAT3 122 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 CHMLP26374 656 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 HRH1P35367 487 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 NSG1P42857 185 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 HMGN5P82970 282 aaKnown RBP3.39□□□□□ -1.87
LINC00557-201ENST00000563184 SPECC1LQ69YQ0 1117 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 STRADAQ7RTN6 431 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 PEX26Q7Z412 305 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 MREGQ8N565 214 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 RNF139Q8WU17 664 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 PIBF1Q8WXW3 757 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 MRPL37Q9BZE1 423 aaKnown RBP3.39□□□□□ -1.87
LINC00557-201ENST00000563184 SLC40A1Q9NP59 571 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 SHPKQ9UHJ6 478 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 NUP50Q9UKX7 468 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 PSG11Q9UQ72 335 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 ASTN1O14525 1302 aa3.39□□□□□ -1.87
LINC00557-201ENST00000563184 RSPH10B2B2RC85 870 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms