RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ETFDHQ16134 617 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 SLC22A10Q63ZE4 541 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 C3orf33Q6P1S2 294 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 CDC20BQ86Y33 519 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 LAX1Q8IWV1 398 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 ESX1Q8N693 406 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 DTX3Q8N9I9 347 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 ABHD4Q8TB40 342 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 NTNG2Q96CW9 530 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 TSPAN10Q9H1Z9 355 aaPredicted RBP8.45□□□□□ -1.06
LINC00838-201ENST00000562956 CHST11Q9NPF2 352 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 SERINC1Q9NRX5 453 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 VSX1Q9NZR4 365 aaPredicted RBP8.45□□□□□ -1.06
LINC00838-201ENST00000562956 B9D1Q9UPM9 204 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 RPH3AQ9Y2J0 694 aaPredicted RBP8.45□□□□□ -1.06
LINC00838-201ENST00000562956 MRPS18BQ9Y676 258 aaKnown RBP8.45□□□□□ -1.06
LINC00838-201ENST00000562956 A0A1W2PNR3 127 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 SLC22A23A1A5C7 686 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 FAM172BPA6NC97 362 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 OGG1O15527 345 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 SLC16A7O60669 478 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 TRIM3O75382 744 aaPredicted RBP8.44□□□□□ -1.06
LINC00838-201ENST00000562956 GAAP10253 952 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 CTLA4P16410 223 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 CD53P19397 219 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 DLSTP36957 453 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 CAPZA2P47755 286 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 GNG2P59768 71 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 ZNF45Q02386 682 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 CHAF1BQ13112 559 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 EIF3IQ13347 325 aaKnown RBP8.44□□□□□ -1.06
LINC00838-201ENST00000562956 CDK5R1Q15078 307 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 TUBA3EQ6PEY2 450 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 ZNF248Q8NDW4 579 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 RNF166Q96A37 237 aaPredicted RBP8.44□□□□□ -1.06
LINC00838-201ENST00000562956 SMIM19Q96E16 107 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 JSRP1Q96MG2 331 aaPredicted RBP8.44□□□□□ -1.06
LINC00838-201ENST00000562956 KCNN2Q9H2S1 579 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 ALKBH4Q9NXW9 302 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 ING1Q9UK53 422 aaPredicted RBP8.44□□□□□ -1.06
LINC00838-201ENST00000562956 CACNA1HO95180 2353 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 ERVH48-1M5A8F1 160 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 TERTO14746 1132 aaKnown RBP8.44□□□□□ -1.06
LINC00838-201ENST00000562956 TMCC2O75069 709 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 SC5DO75845 299 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 SCO1O75880 301 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 TNFSF15O95150 251 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 LIFP15018 202 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 ETV6P41212 452 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 P2RX3P56373 397 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 POU3F1Q03052 451 aaPredicted RBP8.44□□□□□ -1.06
LINC00838-201ENST00000562956 HSF2Q03933 536 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 CSRP2Q16527 193 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 DPY19L4Q7Z388 723 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 CEACAM19Q7Z692 300 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 PIP4P1Q86T03 277 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 NR2C2APQ86WQ0 139 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 OR8H2Q8N162 312 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 UBE2J2Q8N2K1 259 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 OR6N2Q8NGY6 317 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 ASB10Q8WXI3 467 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 ADAD1Q96M93 576 aaKnown RBP8.44□□□□□ -1.06
LINC00838-201ENST00000562956 C5orf34Q96MH7 638 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 NEDD4LQ96PU5 975 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 OR5B2Q96R09 309 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 SNX18Q96RF0 628 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 INTS14Q96SY0 518 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 OR2B2Q9GZK3 357 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 SP140LQ9H930 580 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 MED29Q9NX70 200 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 SPEF1Q9Y4P9 236 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 FKBP7Q9Y680 259 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 CPAMD8Q8IZJ3 1885 aa8.44□□□□□ -1.06
LINC00838-201ENST00000562956 IGLV1-36A0A0B4J1U3 117 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 TRBV2A0A0J9YWF9 115 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 LOC101059948A0A1B0GTJ6 334 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 ALX3O95076 343 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 OR8G3PP0DMU2 310 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 EDNRAP25101 427 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 AZGP1P25311 298 aaKnown RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 SFTPDP35247 375 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 EIF1P41567 113 aaKnown RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 CENPAP49450 140 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 GDI2P50395 445 aaKnown RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 HSF1Q00613 529 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 TMEM176BQ3YBM2 270 aaPredicted RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 SPANXN2Q5MJ10 180 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 H3F3CQ6NXT2 135 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 RPL22L1Q6P5R6 122 aaKnown RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 DND1Q8IYX4 353 aaKnown RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 OR6F1Q8NGZ6 308 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 ZBTB8AQ96BR9 441 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 MAP6Q96JE9 813 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 CEP19Q96LK0 163 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 PDCD1LG2Q9BQ51 273 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 SLC30A2Q9BRI3 323 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 RNF32Q9H0A6 362 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 ABCB9Q9NP78 766 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 B3GAT1Q9P2W7 334 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 MRM2Q9UI43 246 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms