RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 PARP12Q9H0J9 701 aaKnown RBP0.58□□□□□ -2.32
FOXN3-216ENST00000557496 SAV1Q9H4B6 383 aaPredicted RBP0.58□□□□□ -2.32
FOXN3-216ENST00000557496 ZNF639Q9UID6 485 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 SCN4AP35499 1836 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 IGLV3-22A0A075B6J6 115 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 TMEM120BA0PK00 339 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 LRP5LA4QPB2 252 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 CHADO15335 359 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 RGS16O15492 202 aaPredicted RBP0.57□□□□□ -2.32
FOXN3-216ENST00000557496 OR1F1O43749 312 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 AP2A1O95782 977 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 GNAO1P09471 354 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 CCDC130P13994 396 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 HLA-DPA1P20036 260 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 CDKN2BP42772 138 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 IHHQ14623 411 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 DUSP7Q16829 419 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 C1orf220Q5T0J3 134 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 PLA2G4DQ86XP0 818 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 ZNF683Q8IZ20 524 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 C7orf34Q96L11 122 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 AMDHD1Q96NU7 426 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 TUBGCP2Q9BSJ2 902 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 MRPL47Q9HD33 250 aaKnown RBP0.57□□□□□ -2.32
FOXN3-216ENST00000557496 PALMDQ9NP74 551 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 RAB23Q9ULC3 237 aa0.57□□□□□ -2.32
FOXN3-216ENST00000557496 SPAG9O60271 1321 aaKnown RBP0.57□□□□□ -2.32
FOXN3-216ENST00000557496 KMT2BQ9UMN6 2715 aaPredicted RBP0.56□□□□□ -2.32
FOXN3-216ENST00000557496 CENPVL3A0A0U1RRI6 287 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 TCRBV9S1A1TA0A576 114 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 POLR1CO15160 346 aaPredicted RBP0.56□□□□□ -2.32
FOXN3-216ENST00000557496 TCN1P20061 433 aaPredicted RBP0.56□□□□□ -2.32
FOXN3-216ENST00000557496 DNAJB1P25685 340 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 AQP2P41181 271 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 PJVKQ0ZLH3 352 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 FUT5Q11128 374 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 FAM53BQ14153 422 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 PRPSAP1Q14558 356 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 CEBPEQ15744 281 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 DNAJC24Q6P3W2 148 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 CCDC65Q8IXS2 484 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 OR2L3Q8NG85 312 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 OR1F12Q8NHA8 337 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 LKAAEAR1Q8TD35 194 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 SPRYD4Q8WW59 207 aaPredicted RBP0.56□□□□□ -2.32
FOXN3-216ENST00000557496 EFHD2Q96C19 240 aaPredicted RBP0.56□□□□□ -2.32
FOXN3-216ENST00000557496 THAP9Q9H5L6 903 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 NEK6Q9HC98 313 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 CTSFQ9UBX1 484 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 KIAA1257Q9ULG3 409 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 TMCO1Q9UM00 188 aa0.56□□□□□ -2.32
FOXN3-216ENST00000557496 C5orf63A6NC05 138 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 ZNF726A6NNF4 738 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 BTN3A3O00478 584 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 HSD17B6O14756 317 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 UBTFL6P0CB48 400 aaPredicted RBP0.55□□□□□ -2.32
FOXN3-216ENST00000557496 IL1RNP18510 177 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 AK4P27144 223 aaPredicted RBP0.55□□□□□ -2.32
FOXN3-216ENST00000557496 FUSP35637 526 aaKnown RBP eCLIP0.55□□□□□ -2.32
FOXN3-216ENST00000557496 QARSP47897 775 aaKnown RBP0.55□□□□□ -2.32
FOXN3-216ENST00000557496 SCRN3Q0VDG4 424 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 MAB21L1Q13394 359 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 OR5I1Q13606 314 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 PON2Q15165 354 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 GUSBP11Q6P575 273 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 KCNIP4Q6PIL6 250 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 MRPL38Q96DV4 380 aaKnown RBP0.55□□□□□ -2.32
FOXN3-216ENST00000557496 TBL1YQ9BQ87 522 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 SLC25A2Q9BXI2 301 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 TMEM59Q9BXS4 323 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 NHEJ1Q9H9Q4 299 aaPredicted RBP0.55□□□□□ -2.32
FOXN3-216ENST00000557496 MCCC2Q9HCC0 563 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 CBY1Q9Y3M2 126 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 IKBKGQ9Y6K9 419 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 MSH6P52701 1360 aa0.55□□□□□ -2.32
FOXN3-216ENST00000557496 BAHCC1Q9P281 2608 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 TENM3Q9P273 2699 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 COL22A1Q8NFW1 1626 aaPredicted RBP0.54□□□□□ -2.32
FOXN3-216ENST00000557496 HIDE1A8MVS5 230 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 A8MXQ7 604 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 H0YJW9 148 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 OVOL1O14753 267 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 HLA-DQB1P01920 261 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 HRES1P13985 223 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 TNNI3P19429 210 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 RORAP35398 523 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 NUCB2P80303 420 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 C1orf61Q13536 156 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 RGNQ15493 299 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 OR2A2Q6IF42 318 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 SPNS3Q6ZMD2 512 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 C16orf47Q6ZP98 133 aaPredicted RBP0.54□□□□□ -2.32
FOXN3-216ENST00000557496 TMEM179Q6ZVK1 233 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 PEX26Q7Z412 305 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 HDDC2Q7Z4H3 204 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 NT5DC3Q86UY8 548 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 OR52H1Q8NGJ2 320 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 SHC3Q92529 594 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 HGDQ93099 445 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 TMEM159Q96B96 161 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms