RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 D6RAR5 112 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 MS4A18H0YCH9 400 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 MPZL1O95297 269 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 ADRB1P08588 477 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 RAB25P57735 213 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 MS4A18Q3C1V0 323 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 TBRG1Q3YBR2 411 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 TMEM205Q6UW68 189 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 WDFY1Q8IWB7 410 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 ZNF676Q8N7Q3 588 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 TRIM63Q969Q1 353 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 DMRTB1Q96MA1 342 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 BEX2Q9BXY8 128 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 ZNF221Q9UK13 617 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 FKBP7Q9Y680 259 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 TMEM14AQ9Y6G1 99 aa14.69□□□□□ -0.06
COL4A1-204ENST00000543140 SLC43A1O75387 559 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 CELA2AP08217 269 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 FOXK1P85037 733 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 PUDPQ08623 228 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 GPR176Q14439 515 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 BTBD16Q32M84 506 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 Q499Y3 187 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 MRPL14Q6P1L8 145 aaKnown RBP14.68□□□□□ -0.06
COL4A1-204ENST00000543140 C1orf210Q8IVY1 113 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 PRSS35Q8N3Z0 413 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 OR5M1Q8NGP8 315 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 OR8K3Q8NH51 312 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 UPRTQ96BW1 309 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 DEFB126Q9BYW3 111 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 TMEM185BQ9H7F4 350 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 ELOVL3Q9HB03 270 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 GTF2A1LQ9UNN4 478 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 CNTRLQ7Z7A1 2325 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 IGLV1-36A0A0B4J1U3 117 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 IFITM5A6NNB3 132 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 RAD1O60671 282 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 CD3GP09693 182 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 FAM157BP0CG42 384 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 IFNGR1P15260 489 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 ADAM8P78325 824 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 EGR3Q06889 387 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 TATDN3Q17R31 274 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 PYHIN1Q6K0P9 492 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 ZNF248Q8NDW4 579 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 DNAAF1Q8NEP3 725 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 VSX1Q9NZR4 365 aaPredicted RBP14.68□□□□□ -0.06
COL4A1-204ENST00000543140 C19orf25Q9UFG5 118 aaPredicted RBP14.68□□□□□ -0.06
COL4A1-204ENST00000543140 SPATA2Q9UM82 520 aa14.68□□□□□ -0.06
COL4A1-204ENST00000543140 OR4C45A6NMZ5 311 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 EFNA2O43921 213 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 ONECUT2O95948 504 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 FGF5P12034 268 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 APOBEC1P41238 236 aaKnown RBP14.67□□□□□ -0.06
COL4A1-204ENST00000543140 AGFG1P52594 562 aaKnown RBP14.67□□□□□ -0.06
COL4A1-204ENST00000543140 DGCR2P98153 550 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 FMODQ06828 376 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 C19orf57Q0VDD7 668 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 LYPD8Q6UX82 237 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 PRSS45Q7RTY3 260 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 DUSP18Q8NEJ0 188 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 PHYHIPQ92561 330 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 TTC9Q92623 222 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 MR1Q95460 341 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 ZC3HAV1LQ96H79 300 aaKnown RBP14.67□□□□□ -0.06
COL4A1-204ENST00000543140 ST6GAL2Q96JF0 529 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 ABCG5Q9H222 651 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 SLC26A1Q9H2B4 701 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 TCF7L1Q9HCS4 588 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 DDX28Q9NUL7 540 aaKnown RBP14.67□□□□□ -0.06
COL4A1-204ENST00000543140 MED29Q9NX70 200 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 COA3Q9Y2R0 106 aaPredicted RBP14.67□□□□□ -0.06
COL4A1-204ENST00000543140 HMX3A6NHT5 357 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 YKT6O15498 198 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 ITGA10O75578 1167 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 WNT11O96014 354 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 ZNF41P51814 821 aaPredicted RBP14.67□□□□□ -0.06
COL4A1-204ENST00000543140 POU3F1Q03052 451 aaPredicted RBP14.67□□□□□ -0.06
COL4A1-204ENST00000543140 TLE3Q04726 772 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 IL11RAQ14626 422 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 STPG1Q5TH74 334 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 STAC2Q6ZMT1 411 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 MDGA2Q7Z553 956 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 SERPINA12Q8IW75 414 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 CMTM4Q8IZR5 234 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 PPP1R14AQ96A00 147 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 V9GY05 133 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 SDK2Q58EX2 2172 aa14.67□□□□□ -0.06
COL4A1-204ENST00000543140 PDCD5O14737 125 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 PTGDSP41222 190 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 C5orf46Q6UWT4 87 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 H1FNTQ75WM6 255 aaPredicted RBP14.66□□□□□ -0.06
COL4A1-204ENST00000543140 C5orf34Q96MH7 638 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 RASL10BQ96S79 203 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 MNTQ99583 582 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 MFRPQ9BY79 579 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 LIN7BQ9HAP6 207 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 NEK6Q9HC98 313 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 GPN3Q9UHW5 284 aaPredicted RBP14.66□□□□□ -0.06
COL4A1-204ENST00000543140 NPIPA5E9PKD4 350 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms