RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 UBTD1Q9HAC8 227 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 ADAM18Q9Y3Q7 739 aa19.84■□□□□ 0.77
SFSWAP-204ENST00000535399 ANKRD17O75179 2603 aaKnown RBP19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 ZNF503-AS2A6NEH8 195 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 HOXB6P17509 224 aaKnown RBP19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 PTAFRP25105 342 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 ACVR1BP36896 505 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 ERFP50548 548 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 CBX1P83916 185 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 ADAM5Q6NVV9 412 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 ASRGL1Q7L266 308 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 ARIH2OSQ8N7S6 290 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 OR9Q2Q8NGE9 314 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 GNPDA2Q8TDQ7 276 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 NINJ1Q92982 152 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 ALG12Q9BV10 488 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 NDEL1Q9GZM8 345 aa19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 CCM2LQ9NUG4 571 aaPredicted RBP19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 CRNNQ9UBG3 495 aaPredicted RBP19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 SAMHD1Q9Y3Z3 626 aaKnown RBP19.83■□□□□ 0.77
SFSWAP-204ENST00000535399 IGKV1D-43A0A0B4J1Z2 117 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 A6NIZ1 184 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 SHISA9B4DS77 424 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 ABCD4O14678 606 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 HS3ST1O14792 307 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 CCNB2O95067 398 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 ATE1O95260 518 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 B4GALT1P15291 398 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 PAX7P23759 505 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 RAP1BP61224 184 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 RAP1AP62834 184 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 TSPAN31Q12999 210 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 C10orf128Q5T292 105 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 SMARCD3Q6STE5 483 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 CCDC121Q6ZUS5 278 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 CCDC36Q8IYA8 594 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 LINC00471Q8N535 108 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 FAM169BQ8N8A8 192 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 PAPD5Q8NDF8 572 aaKnown RBP19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 KBTBD8Q8NFY9 601 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 AKAP1Q92667 903 aaKnown RBP eCLIP19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 NEUROG1Q92886 237 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 SLCO4A1Q96BD0 722 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 Q96M85 177 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 REEP1Q9H902 201 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 NRIP3Q9NQ35 241 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 TMEM38BQ9NVV0 291 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 IL20RAQ9UHF4 553 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 U3KQV3 271 aa19.82■□□□□ 0.76
SFSWAP-204ENST00000535399 IGHV1-18A0A0C4DH31 117 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 CST1P01037 141 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 IGLV1-44P01699 117 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 RAF1P04049 648 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 CD53P19397 219 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 IST1P53990 364 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 SPOCK1Q08629 439 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 CD47Q08722 323 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 ZNF672Q499Z4 452 aaPredicted RBP19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 SLC25A47Q6Q0C1 308 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 DPY19L2P2Q6ZN68 376 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 CLDN22Q8N7P3 220 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 FANK1Q8TC84 345 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 B3GNT2Q9NY97 397 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 ZNF224Q9NZL3 707 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 GRHPRQ9UBQ7 328 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 EDARQ9UNE0 448 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 MGAT4BQ9UQ53 548 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 AKAP9Q99996 3911 aa19.81■□□□□ 0.76
SFSWAP-204ENST00000535399 FKBP6O75344 327 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 SLC2A10O95528 541 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 HLA-HP01893 362 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 CBR1P16152 277 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 FMODQ06828 376 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 MICAQ29983 383 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 RFX4Q33E94 735 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 C3orf36Q3SXR2 165 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 MESTQ5EB52 335 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 C20orf204Q6ZNR8 217 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 MDP1Q86V88 176 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 SLC38A2Q96QD8 506 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 OR52D1Q9H346 318 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 SMURF2Q9HAU4 748 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 MOV10Q9HCE1 1003 aaKnown RBP19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 UGT2A1Q9Y4X1 527 aa19.8■□□□□ 0.76
SFSWAP-204ENST00000535399 MYO9AB2RTY4 2548 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 TEX13CA0A0J9YWL9 993 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 ARHGEF9O43307 516 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 GASTP01350 101 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 IGKV3-15P01624 115 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 DNASE1P24855 282 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 SDHAP31040 664 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 ZNF84P51523 738 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 KEAP1Q14145 624 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 GK3PQ14409 553 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 THEM4Q5T1C6 240 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 GPR139Q6DWJ6 353 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 ZNF620Q6ZNG0 422 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 SKA3Q8IX90 412 aa19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 PIAS4Q8N2W9 510 aaPredicted RBP19.79■□□□□ 0.76
SFSWAP-204ENST00000535399 SLC22A24Q8N4F4 322 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms