RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 PPP2R2BQ00005 443 aa16.8■□□□□ 0.28
CCHCR1-230ENST00000513222 RUNX1T1Q06455 604 aa16.8■□□□□ 0.28
CCHCR1-230ENST00000513222 FHL1Q13642 323 aa16.8■□□□□ 0.28
CCHCR1-230ENST00000513222 TAF11Q15544 211 aa16.8■□□□□ 0.28
CCHCR1-230ENST00000513222 ANKDD1AQ495B1 522 aa16.8■□□□□ 0.28
CCHCR1-230ENST00000513222 LRRC23Q53EV4 343 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-230ENST00000513222 PRIMA1Q86XR5 153 aa16.8■□□□□ 0.28
CCHCR1-230ENST00000513222 ZNF584Q8IVC4 421 aa16.8■□□□□ 0.28
CCHCR1-230ENST00000513222 RNF113BQ8IZP6 322 aaKnown RBP16.8■□□□□ 0.28
CCHCR1-230ENST00000513222 A0A1W2PRG6 482 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 IGHMP01871 453 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 QDPRP09417 244 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 ACADSP16219 412 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 PCSK6P29122 969 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 PRDX6P30041 224 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 DAP3P51398 398 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 NPRL3Q12980 569 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 DAG1Q14118 895 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 TMEM249Q2WGJ8 235 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 SPATA21Q7Z572 469 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 FGFBP3Q8TAT2 258 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 HTRA1Q92743 480 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 MCHR2Q969V1 340 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 MS4A3Q96HJ5 214 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 INIPQ9NRY2 104 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 GMPR2Q9P2T1 348 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 FKBP7Q9Y680 259 aa16.79■□□□□ 0.28
CCHCR1-230ENST00000513222 MXRA5Q9NR99 2828 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 LOC390937A0A1W2PQ73 354 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 CXCR6O00574 342 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 TRMUO75648 421 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 SERPINI2O75830 405 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 UMPSP11172 480 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 CD79AP11912 226 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 FUT4P22083 530 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 GIFP27352 417 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 IFNA8P32881 189 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 AQP2P41181 271 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 GIPRP48546 466 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 GSK3BP49841 420 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 SLC7A2P52569 658 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 PRKCDQ05655 676 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 PIGFQ07326 219 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 MELKQ14680 651 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 MSMPQ1L6U9 139 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 TSEN54Q7Z6J9 526 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 VTCN1Q7Z7D3 282 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 HIPK1Q86Z02 1210 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 LRRC75AQ8NAA5 344 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 GEMIN6Q8WXD5 167 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 BPIFA2Q96DR5 249 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 CMTM5Q96DZ9 223 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 TPD52L3Q96J77 140 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 KCNK17Q96T54 332 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 TXNIPQ9H3M7 391 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 ANKRD19PQ9H560 264 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 TMEM160Q9NX00 188 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 SNX13Q9Y5W8 968 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 COL6A5A8TX70 2615 aa16.78■□□□□ 0.28
CCHCR1-230ENST00000513222 hCG_2039718K7EN88 272 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 GPRIN2O60269 458 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 SNX3O60493 162 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 TP53P04637 393 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 IFNW1P05000 195 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 F13BP05160 661 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 MMP7P09237 267 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 CAPZA2P47755 286 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 PTDSS1P48651 473 aaKnown RBP16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 PDLIM4P50479 330 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 MRPS34P82930 218 aaKnown RBP16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 LSM11P83369 360 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 SNTB2Q13425 540 aaKnown RBP16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 LAPTM4AQ15012 233 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 TRAM2Q15035 370 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 NOXO1Q8NFA2 376 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 MOSPD2Q8NHP6 518 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 NEU4Q8WWR8 484 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 MRPL24Q96A35 216 aaKnown RBP16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 ZNF347Q96SE7 839 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 RAB1BQ9H0U4 201 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 ADAM21Q9UKJ8 722 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 CMAHPQ9Y471 501 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 SPEF1Q9Y4P9 236 aa16.77■□□□□ 0.28
CCHCR1-230ENST00000513222 LY6HO94772 140 aa16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 FARS2O95363 451 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 SNAP29O95721 258 aa16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 RAB36O95755 333 aa16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 USF1P22415 310 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 NR4A2P43354 598 aa16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 IFI44LQ53G44 452 aa16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 FNDC8Q8TC99 324 aa16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 ACOT11Q8WXI4 607 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 ELAC2Q9BQ52 826 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 C1orf198Q9H425 327 aa16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 SIAEQ9HAT2 523 aa16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 UGT2A1Q9Y4X1 527 aa16.76■□□□□ 0.27
CCHCR1-230ENST00000513222 A0A087WUU8 490 aa16.75■□□□□ 0.27
CCHCR1-230ENST00000513222 NR2C1P13056 603 aa16.75■□□□□ 0.27
CCHCR1-230ENST00000513222 DRD4P21917 467 aa16.75■□□□□ 0.27
CCHCR1-230ENST00000513222 SLC9A3P48764 834 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms