RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 NSD1Q96L73 2696 aaPredicted RBP11.18□□□□□ -0.62
HDAC1-209ENST00000484305 TRAV27A0A087WT01 109 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 A0A087WUU8 490 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 FAM171A2A8MVW0 826 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 TRMUO75648 421 aaKnown RBP11.17□□□□□ -0.62
HDAC1-209ENST00000484305 OR4A8P0C604 315 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 ACADSP16219 412 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 ZNF14P17017 642 aaPredicted RBP11.17□□□□□ -0.62
HDAC1-209ENST00000484305 TCN1P20061 433 aaPredicted RBP11.17□□□□□ -0.62
HDAC1-209ENST00000484305 DAP3P51398 398 aaKnown RBP11.17□□□□□ -0.62
HDAC1-209ENST00000484305 NUDT6P53370 316 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 RAB1AP62820 205 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 PRKCDQ05655 676 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 FHL1Q13642 323 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 ALG10Q5BKT4 473 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 ARMC4Q5T2S8 1044 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 FAM86B1Q8N7N1 296 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 NUP37Q8NFH4 326 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 NANOS1Q8WY41 292 aaKnown RBP11.17□□□□□ -0.62
HDAC1-209ENST00000484305 POM121Q96HA1 1249 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 LRRC37BQ96QE4 947 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 SH3GL3Q99963 347 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 REG4Q9BYZ8 158 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 TXNIPQ9H3M7 391 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 NMNAT1Q9HAN9 279 aaPredicted RBP11.17□□□□□ -0.62
HDAC1-209ENST00000484305 TMEM38BQ9NVV0 291 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 TAGLN3Q9UI15 199 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 HIF3AQ9Y2N7 669 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 ENPP4Q9Y6X5 453 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 PMF1-BGLAPU3KQ54 211 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 CHD3Q12873 2000 aaKnown RBP11.17□□□□□ -0.62
HDAC1-209ENST00000484305 RTTNQ86VV8 2226 aa11.17□□□□□ -0.62
HDAC1-209ENST00000484305 YLPM1P49750 1951 aaKnown RBP11.16□□□□□ -0.62
HDAC1-209ENST00000484305 FN1P02751 2386 aaKnown RBP11.16□□□□□ -0.62
HDAC1-209ENST00000484305 HTR3EA5X5Y0 456 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 CENPBD1B2RD01 187 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 DCTN3O75935 186 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 LY6HO94772 140 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 RAB36O95755 333 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 OR8G3PP0DMU2 310 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 SAGP10523 405 aaPredicted RBP11.16□□□□□ -0.62
HDAC1-209ENST00000484305 BMP4P12644 408 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 ZNF35P13682 527 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 THBS4P35443 961 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 MSX2P35548 267 aaPredicted RBP11.16□□□□□ -0.62
HDAC1-209ENST00000484305 TOP3AQ13472 1001 aaPredicted RBP11.16□□□□□ -0.62
HDAC1-209ENST00000484305 RAB39AQ14964 217 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 KRT80Q6KB66 452 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 ZNF730Q6ZMV8 503 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 MBOAT2Q6ZWT7 520 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 IGFN1Q86VF2 1251 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 ZNF584Q8IVC4 421 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 RNF113BQ8IZP6 322 aaKnown RBP11.16□□□□□ -0.62
HDAC1-209ENST00000484305 PGAM4Q8N0Y7 254 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 ZNF525Q8N782 197 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 LRRC75AQ8NAA5 344 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 IL17RDQ8NFM7 739 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 OR4K5Q8NGD3 323 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 OR51A7Q8NH64 312 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 ACOT11Q8WXI4 607 aaPredicted RBP11.16□□□□□ -0.62
HDAC1-209ENST00000484305 HDAC2Q92769 488 aaKnown RBP11.16□□□□□ -0.62
HDAC1-209ENST00000484305 C7orf34Q96L11 122 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 TNFRSF13CQ96RJ3 184 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 CDRT15Q96T59 188 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 DENND2DQ9H6A0 471 aaPredicted RBP11.16□□□□□ -0.62
HDAC1-209ENST00000484305 NDUFAF4Q9P032 175 aa11.16□□□□□ -0.62
HDAC1-209ENST00000484305 IGHV4-30-2A0A087WSY4 118 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 IGKV1D-43A0A0B4J1Z2 117 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 NPIPB13A6NJU9 1138 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 EFCAB9A8MZ26 197 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 B9A039 149 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 NPIPB4C9JG80 1138 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 hCG_2039718K7EN88 272 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 CDC42EP2O14613 210 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 GMNNO75496 209 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 PDE5AO76074 875 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 DIRAS1O95057 198 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 UBL3O95164 117 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 SLC2A10O95528 541 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 IGHMP01871 453 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 HSD17B1P14061 328 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 NR4A1P22736 598 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 GPR4P46093 362 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 ZNF133P52736 654 aaPredicted RBP11.15□□□□□ -0.62
HDAC1-209ENST00000484305 EFNA4P52798 201 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 CTXN1P60606 82 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 SNRPD2P62316 118 aaKnown RBP11.15□□□□□ -0.62
HDAC1-209ENST00000484305 VLDLRP98155 873 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 FMODQ06828 376 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 KRTAP1-1Q07627 177 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 SNTB2Q13425 540 aaKnown RBP11.15□□□□□ -0.62
HDAC1-209ENST00000484305 DAG1Q14118 895 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 EFNB3Q15768 340 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 FXNQ16595 210 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 HDDC2Q7Z4H3 204 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 OAFQ86UD1 273 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 CYP4Z1Q86W10 505 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 CLDN22Q8N7P3 220 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 ANKS4BQ8N8V4 417 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 OR10H5Q8NGA6 315 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms