RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CAPZA1P52907 286 aa11.58□□□□□ -0.55
VPS52-218ENST00000482399 UBE2IP63279 158 aaKnown RBP11.58□□□□□ -0.55
VPS52-218ENST00000482399 ZNF273Q14593 569 aa11.58□□□□□ -0.55
VPS52-218ENST00000482399 ZNF776Q68DI1 518 aaPredicted RBP11.58□□□□□ -0.55
VPS52-218ENST00000482399 ANKRD33Q7Z3H0 272 aa11.58□□□□□ -0.55
VPS52-218ENST00000482399 MARCH3Q86UD3 253 aa11.58□□□□□ -0.55
VPS52-218ENST00000482399 SYS1Q8N2H4 156 aa11.58□□□□□ -0.55
VPS52-218ENST00000482399 MIB2Q96AX9 1013 aa11.58□□□□□ -0.55
VPS52-218ENST00000482399 C10orf90Q96M02 699 aa11.58□□□□□ -0.55
VPS52-218ENST00000482399 MOGAT1Q96PD6 335 aa11.58□□□□□ -0.55
VPS52-218ENST00000482399 ELL3Q9HB65 397 aaPredicted RBP11.58□□□□□ -0.55
VPS52-218ENST00000482399 PLXNB3Q9ULL4 1909 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 SPEGQ15772 3267 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 A0A1B0GV50 99 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 OGG1O15527 345 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 SLC16A7O60669 478 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 CSF1P09603 554 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 CD53P19397 219 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 CXCR1P25024 350 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 RPS11P62280 158 aaKnown RBP eCLIP11.58□□□□□ -0.56
VPS52-218ENST00000482399 C2orf76Q3KRA6 126 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 USP53Q70EK8 1073 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 TMEM17Q86X19 198 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 ZNF584Q8IVC4 421 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 OR1J2Q8NGS2 313 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 OR14A16Q8NHC5 309 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 KLHL15Q96M94 604 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 TIMM29Q9BSF4 260 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 MRPS33Q9Y291 106 aaKnown RBP11.58□□□□□ -0.56
VPS52-218ENST00000482399 ZNF337Q9Y3M9 751 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 TDRD6O60522 2096 aaKnown RBP11.58□□□□□ -0.56
VPS52-218ENST00000482399 MPDZO75970 2070 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 NOTCH4Q99466 2003 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 A0A0B4J2A0 478 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 J3QRE1 110 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 GPR31O00270 319 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 SOX1O00570 391 aaPredicted RBP11.58□□□□□ -0.56
VPS52-218ENST00000482399 SCDO00767 359 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 CLDN4O14493 209 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 ATG12O94817 140 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 CTSBP07858 339 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 ERGP11308 486 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 GLULP15104 373 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 ADRA2CP18825 462 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 DPP4P27487 766 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 AVPR2P30518 371 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 RAG2P55895 527 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 CDH26Q8IXH8 852 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 ZNF101Q8IZC7 436 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 ESX1Q8N693 406 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 BVESQ8NE79 360 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 FAM71CQ8NEG0 241 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 SLC25A44Q96H78 314 aaPredicted RBP11.58□□□□□ -0.56
VPS52-218ENST00000482399 TEX101Q9BY14 249 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 FRRS1LQ9P0K9 344 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 SHPKQ9UHJ6 478 aa11.58□□□□□ -0.56
VPS52-218ENST00000482399 GGT3PA6NGU5 568 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 OR5H14A6NHG9 310 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 PRR32B1ATL7 298 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 GLCEO94923 617 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 EFEMP2O95967 443 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 HOXB2P14652 356 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 CBR1P16152 277 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 TDGQ13569 410 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 RNASE10Q5GAN6 216 aaKnown RBP11.57□□□□□ -0.56
VPS52-218ENST00000482399 MDGA2Q7Z553 956 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 GTPBP8Q8N3Z3 284 aaPredicted RBP11.57□□□□□ -0.56
VPS52-218ENST00000482399 AVL9Q8NBF6 648 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 MARC2Q969Z3 335 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 ZBTB8AQ96BR9 441 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 SPACA5Q96QH8 159 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 HRH4Q9H3N8 390 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 PRTFDC1Q9NRG1 225 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 MFSD2BA6NFX1 497 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 PTP4A3O75365 173 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 OPN1LWP04000 364 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 PI3P19957 117 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 S100A10P60903 97 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 IL13RA1P78552 427 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 CCDC157Q569K6 752 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 HLA-DQA1Q5Y7H0 255 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 RGS7BPQ6MZT1 257 aaPredicted RBP11.57□□□□□ -0.56
VPS52-218ENST00000482399 CBLN3Q6UW01 205 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 CCDC36Q8IYA8 594 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 SPAG16Q8N0X2 631 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 NPEPL1Q8NDH3 523 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 OR10R2Q8NGX6 335 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 OR2G2Q8NGZ5 317 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 ZNF417Q8TAU3 575 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 SLC2A12Q8TD20 617 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 OR2A5Q96R48 311 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 MYADMQ96S97 322 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 INTS14Q96SY0 518 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 HDAC8Q9BY41 377 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 APMAPQ9HDC9 416 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 ENTPD2Q9Y5L3 495 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 C17orf51A8MQB3 221 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 OR4E1P0C645 316 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 C5AR1P21730 350 aa11.57□□□□□ -0.56
VPS52-218ENST00000482399 HTRA4P83105 476 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms