RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PLA2G2DQ9UNK4 145 aa5.22□□□□□ -1.57
HDAC3-206ENST00000471968 KLK5Q9Y337 293 aaPredicted RBP5.22□□□□□ -1.57
HDAC3-206ENST00000471968 TCRBV7S2A1N4TA0A589 114 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 MAGEB16A2A368 324 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 NKX6-3A6NJ46 265 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 CCL24O00175 119 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 ANKRD28O15084 1053 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 RTL8CO15255 209 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 XRCC3O43542 346 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 SPNP16150 400 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 ATP6V1C1P21283 382 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 PAICSP22234 425 aaKnown RBP5.21□□□□□ -1.58
HDAC3-206ENST00000471968 FKBP2P26885 142 aaKnown RBP5.21□□□□□ -1.58
HDAC3-206ENST00000471968 PRKAR1BP31321 381 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 PMELP40967 661 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 MAP3K8P41279 467 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 RGS6P49758 472 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 ANXA11P50995 505 aaKnown RBP5.21□□□□□ -1.58
HDAC3-206ENST00000471968 ACSM1Q08AH1 577 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 FHL3Q13643 280 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 CEACAM7Q14002 265 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 NR1I3Q14994 352 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 OR7A5Q15622 319 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 AANATQ16613 207 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 DUSP5Q16690 384 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 PRSS53Q2L4Q9 553 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 TBC1D28Q2M2D7 210 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 MTX3Q5HYI7 312 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 CDKL4Q5MAI5 379 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 CDC73Q6P1J9 531 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 BTN2A1Q7KYR7 527 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 PIGWQ7Z7B1 504 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 IGFN1Q86VF2 1251 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 TEX9Q8N6V9 391 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 PDPRQ8NCN5 879 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 ZNF563Q8TA94 476 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 FGFBP3Q8TAT2 258 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 SLC25A40Q8TBP6 338 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 KLF14Q8TD94 323 aaPredicted RBP5.21□□□□□ -1.58
HDAC3-206ENST00000471968 ST6GALNAC6Q969X2 333 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 TUBGCP3Q96CW5 907 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 DDIT4LQ96D03 193 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 RAX2Q96IS3 184 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 OR2V2Q96R30 315 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 OR2J1Q9GZK6 312 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 TINAGL1Q9GZM7 467 aaPredicted RBP5.21□□□□□ -1.58
HDAC3-206ENST00000471968 IL19Q9UHD0 177 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 PRDM4Q9UKN5 801 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 RNF11Q9Y3C5 154 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 ANGPTL3Q9Y5C1 460 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 LYVE1Q9Y5Y7 322 aa5.21□□□□□ -1.58
HDAC3-206ENST00000471968 IGHV3-64DA0A0J9YX35 117 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 ELOVL7A1L3X0 281 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 ZC3H12DA2A288 527 aaKnown RBP5.2□□□□□ -1.58
HDAC3-206ENST00000471968 MANBAO00462 879 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 SURF4O15260 269 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 TIMM8AO60220 97 aaPredicted RBP5.2□□□□□ -1.58
HDAC3-206ENST00000471968 SNAP29O95721 258 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 GPIP06744 558 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 PRPS2P11908 318 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 PTMSP20962 102 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 CCNOP22674 350 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 ACAA2P42765 397 aaKnown RBP5.2□□□□□ -1.58
HDAC3-206ENST00000471968 RAB13P51153 203 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 UBE2E1P51965 193 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 RWDD2BP57060 319 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 TRA2BP62995 288 aaKnown RBP5.2□□□□□ -1.58
HDAC3-206ENST00000471968 SKP2Q13309 424 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 MFSD13AQ14CX5 517 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 OR4D1Q15615 310 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 KCTD19Q17RG1 926 aaPredicted RBP5.2□□□□□ -1.58
HDAC3-206ENST00000471968 MBNL2Q5VZF2 373 aaKnown RBP5.2□□□□□ -1.58
HDAC3-206ENST00000471968 COLCA1Q6ZS62 124 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 SZRD1Q7Z422 152 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 GRINAQ7Z429 371 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 KDM8Q8N371 416 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 CDRT4Q8N9R6 151 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 SLC26A10Q8NG04 563 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 HOXB13Q92826 284 aaPredicted RBP5.2□□□□□ -1.58
HDAC3-206ENST00000471968 ATF6BQ99941 703 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 NUP62CLQ9H1M0 184 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 GLIPR2Q9H4G4 154 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 ELOVL6Q9H5J4 265 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 TCF7L2Q9NQB0 619 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 TMCC3Q9ULS5 477 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 SLC12A4Q9UP95 1085 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 TCF19Q9Y242 345 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 POFUT2Q9Y2G5 429 aa5.2□□□□□ -1.58
HDAC3-206ENST00000471968 TMEM72A0PK05 275 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 LIPT2A6NK58 231 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 IFNL4K9M1U5 179 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 HDAC3O15379 428 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 ADAM20O43506 726 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 AKR1B10O60218 316 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 SCN2BO60939 215 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 HSPA4LO95757 839 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 UBTFL6P0CB48 400 aaPredicted RBP5.19□□□□□ -1.58
HDAC3-206ENST00000471968 SLC6A1P30531 599 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 KCNJ1P48048 391 aa5.19□□□□□ -1.58
HDAC3-206ENST00000471968 CEBPDP49716 269 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms