RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 SRP14P37108 136 aaKnown RBP6.1□□□□□ -1.43
VPS41-208ENST00000448833 RBM34P42696 430 aaKnown RBP6.1□□□□□ -1.43
VPS41-208ENST00000448833 DAP3P51398 398 aaKnown RBP6.1□□□□□ -1.43
VPS41-208ENST00000448833 DVL1P1P54792 670 aaPredicted RBP6.1□□□□□ -1.43
VPS41-208ENST00000448833 CLRN1P58418 232 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 RIN1Q13671 783 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 NFYCQ13952 458 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 TAF11Q15544 211 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 ZNF74Q16587 644 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 DUSP7Q16829 419 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 TBC1D28Q2M2D7 210 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 OXLD1Q5BKU9 147 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 ERICH5Q6P6B1 374 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 TMEM154Q6P9G4 183 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 NHLRC1Q6VVB1 395 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 CCDC80Q76M96 950 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 HDXQ7Z353 690 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 PHC2Q8IXK0 858 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 SLC22A24Q8N4F4 322 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 SMYD1Q8NB12 490 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 CPEB3Q8NE35 698 aaKnown RBP6.1□□□□□ -1.43
VPS41-208ENST00000448833 SNX33Q8WV41 574 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 C11orf40Q8WZ69 217 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 RDH5Q92781 318 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 TMEM54Q969K7 222 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 ZNF837Q96EG3 531 aaPredicted RBP6.1□□□□□ -1.43
VPS41-208ENST00000448833 TXNDC15Q96J42 360 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 CGREF1Q99674 301 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 ARHGDIGQ99819 225 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 ECSITQ9BQ95 431 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 BCL2L14Q9BZR8 327 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 KAT8Q9H7Z6 458 aaKnown RBP6.1□□□□□ -1.43
VPS41-208ENST00000448833 RNF121Q9H920 327 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 VIPAS39Q9H9C1 493 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 SEC14L4Q9UDX3 406 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 DUSP13Q9UII6 198 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 AP3M1Q9Y2T2 418 aa6.1□□□□□ -1.43
VPS41-208ENST00000448833 A0A1W2PPW3 197 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 NPIPB13A6NJU9 1138 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 CPSF4LA6NMK7 179 aaKnown RBP6.09□□□□□ -1.43
VPS41-208ENST00000448833 BBIP1A8MTZ0 92 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 NPIPB4C9JG80 1138 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 C11orf98E9PRG8 122 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 BLOC1S5-TXNDC5H3BN57 136 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 DHHO43323 396 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 TPST2O60704 377 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 LILRA1O75019 489 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 SERPINI2O75830 405 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 SNAP29O95721 258 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 CH25HO95992 272 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 MT-ND1P03886 318 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 QDPRP09417 244 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 ASAH2BP0C7U1 165 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 DRD4P21917 467 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 PCGF2P35227 344 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 LIPAP38571 399 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 GPR6P46095 362 aaPredicted RBP6.09□□□□□ -1.43
VPS41-208ENST00000448833 GIPRP48546 466 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 CDH15P55291 814 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 KLF3P57682 345 aaPredicted RBP6.09□□□□□ -1.43
VPS41-208ENST00000448833 TAS2R41P59536 307 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 MAPRE2Q15555 327 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 FXNQ16595 210 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 NKPD1Q17RQ9 610 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 VMACQ2NL98 169 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 CR1LQ2VPA4 569 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 ANKDD1AQ495B1 522 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 COQ5Q5HYK3 327 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 PHYHD1Q5SRE7 291 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 RGS7BPQ6MZT1 257 aaPredicted RBP6.09□□□□□ -1.43
VPS41-208ENST00000448833 ARL9Q6T311 187 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 SLC16A14Q7RTX9 510 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 NANOGNBQ7Z5D8 188 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 GLCCI1Q86VQ1 547 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 PTOV1Q86YD1 416 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 SKA3Q8IX90 412 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 ALDH16A1Q8IZ83 802 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 PCYOX1LQ8NBM8 494 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 SLC30A7Q8NEW0 376 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 OR6T1Q8NGN1 323 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 ZNF519Q8TB69 540 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 SYNPRQ8TBG9 265 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 LZICQ8WZA0 190 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 C1orf159Q96HA4 380 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 ZNF75AQ96N20 296 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 SNX18Q96RF0 628 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 ZNF426Q9BUY5 554 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 MRPL37Q9BZE1 423 aaKnown RBP6.09□□□□□ -1.43
VPS41-208ENST00000448833 IKZF5Q9H5V7 419 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 SMURF2Q9HAU4 748 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 CDH20Q9HBT6 801 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 TMEM38BQ9NVV0 291 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 GID8Q9NWU2 228 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 NKIRAS2Q9NYR9 191 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 TAS2R5Q9NYW4 299 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 EIF3KQ9UBQ5 218 aaKnown RBP6.09□□□□□ -1.43
VPS41-208ENST00000448833 SLC7A7Q9UM01 511 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 GRIP1Q9Y3R0 1128 aa6.09□□□□□ -1.43
VPS41-208ENST00000448833 A0A0G2JND7 137 aa6.08□□□□□ -1.44
VPS41-208ENST00000448833 LRP5LA4QPB2 252 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms