RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 CTNSO60931 367 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 ADAMTS4O75173 837 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 NAGAP17050 411 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 HTRA4P83105 476 aaPredicted RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 KIR2DS3Q14952 304 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 OR51A4Q8NGJ6 313 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 OR51A2Q8NGJ7 313 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 INTS12Q96CB8 462 aaKnown RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 SLC25A37Q9NYZ2 338 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 CROCCQ5TZA2 2017 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 NME1P15531 152 aaKnown RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 ZNF93P35789 620 aaPredicted RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 SNRPNP63162 240 aaKnown RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 ARHGAP11BQ3KRB8 267 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 HAVCR2Q8TDQ0 301 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 ZNF566Q969W8 418 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 TVP23CQ96ET8 276 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 CSNK1G1Q9HCP0 422 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 TAAR2Q9P1P5 351 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 USP3Q9Y6I4 520 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 SERINC4A6NH21 518 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 ENSAO43768 121 aaKnown RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 HNRNPA1P09651 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
UBR4-205ENST00000417040 ABOP16442 354 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 GABRB1P18505 474 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 CAMK2BQ13554 666 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 MED25Q71SY5 747 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 CDH26Q8IXH8 852 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 C22orf15Q8WYQ4 148 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 C10orf90Q96M02 699 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 COL14A1Q05707 1796 aaKnown RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 UMAD1C9J7I0 102 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 C17orf112F2Z3M2 114 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 PI3P19957 117 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 BCKDHBP21953 392 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 CD80P33681 288 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 SNRPGP62308 76 aaKnown RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 RPS15P62841 145 aaKnown RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 ACTBL2Q562R1 376 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 RBMS3Q6XE24 437 aaKnown RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 KIAA0907Q7Z7F0 614 aaPredicted RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 TMEM123Q8N131 208 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 CPXM2Q8N436 756 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 CNEP1R1Q8N9A8 125 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 SLC23A1Q9UHI7 598 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 CCL26Q9Y258 94 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 ZNF724A8MTY0 619 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 CYB5BO43169 146 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 GPRIN2O60269 458 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 UTS2O95399 124 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 BCL6P41182 706 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 MRPL19P49406 292 aaKnown RBP11.1□□□□□ -0.63
UBR4-205ENST00000417040 ANGPTL5Q86XS5 388 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 ARHGAP9Q9BRR9 750 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 UBQLN3Q9H347 655 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 AKIP1Q9NQ31 210 aa11.1□□□□□ -0.63
UBR4-205ENST00000417040 DMRTC1Q5HYR2 192 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 ZNF684Q5T5D7 378 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 NEURL3Q96EH8 262 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 SLC39A13Q96H72 371 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 NKX3-1Q99801 234 aaPredicted RBP11.09□□□□□ -0.63
UBR4-205ENST00000417040 NDUFB11Q9NX14 153 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 LOC102725191A0A1B0GVB3 256 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 PRDX1Q06830 199 aaKnown RBP11.09□□□□□ -0.63
UBR4-205ENST00000417040 ADGRE4PQ86SQ3 457 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 FAM58AQ8N1B3 248 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 LIPHQ8WWY8 451 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 ATF6BQ99941 703 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 IKZF5Q9H5V7 419 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 PRSS16Q9NQE7 514 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 PPP1R14DQ9NXH3 145 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 ZNF629Q9UEG4 869 aaPredicted RBP11.09□□□□□ -0.63
UBR4-205ENST00000417040 OR52A1Q9UKL2 312 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 ETV7Q9Y603 341 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 HTR3AP46098 478 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 BTG1P62324 171 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 IL34Q6ZMJ4 242 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 TXN2Q99757 166 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 GSX2Q9BZM3 304 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 NKX2-4Q9H2Z4 354 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 PIGLQ9Y2B2 252 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 COA3Q9Y2R0 106 aaPredicted RBP11.09□□□□□ -0.63
UBR4-205ENST00000417040 ADAM10O14672 748 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 HS3ST1O14792 307 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 EPHA2P29317 976 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 CD300CQ08708 224 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 BAMBIQ13145 260 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 ZNF385BQ569K4 471 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 TMEM201Q5SNT2 666 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 RTL6Q6ICC9 239 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 HTR3DQ70Z44 454 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 SLC16A14Q7RTX9 510 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 RLN3Q8WXF3 142 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 LRIT1Q9P2V4 623 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 RICTORQ6R327 1708 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 TMED7-TICAM2A0A0A6YYA0 188 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 TCRBV5S1A1TA0A578 114 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 DPP4P27487 766 aa11.09□□□□□ -0.63
UBR4-205ENST00000417040 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms