RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 LETMD1Q6P1Q0 360 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 MISPQ8IVT2 679 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 BATF2Q8N1L9 274 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 OR8J2Q8NGG1 315 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 OR5AR1Q8NGP9 310 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 DTD2Q96FN9 168 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 MCOLN1Q9GZU1 580 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 DOPEY2Q9Y3R5 2298 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 POM121CA8CG34 1229 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 CD6P30203 668 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 PITX1P78337 314 aaPredicted RBP11.18□□□□□ -0.62
PCF11-201ENST00000298281 HTRA4P83105 476 aaPredicted RBP11.18□□□□□ -0.62
PCF11-201ENST00000298281 PDZD11Q5EBL8 140 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 B3GNTL1Q67FW5 361 aaPredicted RBP11.18□□□□□ -0.62
PCF11-201ENST00000298281 SVBPQ8N300 66 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 ZNF582Q96NG8 517 aaPredicted RBP11.18□□□□□ -0.62
PCF11-201ENST00000298281 ATP13A2Q9NQ11 1180 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 CHD5Q8TDI0 1954 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 SLC22A23A1A5C7 686 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 M0R1B8 84 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 CAPNS1P04632 268 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 CSNK1DP48730 415 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 SSR4P51571 173 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 CLDN10P78369 228 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 LSAMPQ13449 338 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 BHLHE23Q8NDY6 225 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 SLC6A20Q9NP91 592 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 M0R3H8 397 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 UPK1BO75841 260 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 DDAH2O95865 285 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 SLC10A3P09131 477 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 UBBP0CG47 229 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 P2RY2P41231 377 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 ZNF322Q6U7Q0 402 aaPredicted RBP11.18□□□□□ -0.62
PCF11-201ENST00000298281 RHOUQ7L0Q8 258 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 LRRC56Q8IYG6 542 aaPredicted RBP11.18□□□□□ -0.62
PCF11-201ENST00000298281 NPWQ8N729 165 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 OR52H1Q8NGJ2 320 aa11.18□□□□□ -0.62
PCF11-201ENST00000298281 RFXAPO00287 272 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 ARNTLO00327 626 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 ALKBH6Q3KRA9 238 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 PHLDA2Q53GA4 152 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 ZCCHC4Q9H5U6 513 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.17□□□□□ -0.62
PCF11-201ENST00000298281 FMN2Q9NZ56 1722 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 CA5AP35218 305 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 RBP2P50120 134 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 ADPRMQ3LIE5 342 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 TSEN54Q7Z6J9 526 aaKnown RBP11.17□□□□□ -0.62
PCF11-201ENST00000298281 WFDC8Q8IUA0 241 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 RNF113BQ8IZP6 322 aaKnown RBP11.17□□□□□ -0.62
PCF11-201ENST00000298281 CHST14Q8NCH0 376 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 PIGQQ9BRB3 760 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 IGSF5Q9NSI5 407 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 DOCK8Q8NF50 2099 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 TMEM189-UBE2V1I3L0A0 370 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 NKX2-5P52952 324 aaPredicted RBP11.17□□□□□ -0.62
PCF11-201ENST00000298281 P2RX3P56373 397 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 SELPLGQ14242 412 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 GLB1L2Q8IW92 636 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 KCTD12Q96CX2 325 aaKnown RBP11.17□□□□□ -0.62
PCF11-201ENST00000298281 C4orf36Q96KX1 117 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 LHPPQ9H008 270 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 OR51J1Q9H342 316 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 CNIH4Q9P003 139 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 TRGV8A0A0C4DH27 118 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 DTWD1Q8N5C7 304 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 GMLQ99445 158 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 MFRPQ9BY79 579 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 PTTG3PQ9NZH4 202 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 PIGLQ9Y2B2 252 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 MYOM1P52179 1685 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 CASP3P42574 277 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 WDR5P61964 334 aaKnown RBP11.17□□□□□ -0.62
PCF11-201ENST00000298281 ACKR1Q16570 336 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 PGAP1Q75T13 922 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 MEX3DQ86XN8 651 aaKnown RBP11.17□□□□□ -0.62
PCF11-201ENST00000298281 LINC00469Q8N7U9 141 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 OR9Q2Q8NGE9 314 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 INPP5KQ9BT40 448 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 THAP7Q9BT49 309 aaPredicted RBP11.17□□□□□ -0.62
PCF11-201ENST00000298281 DNMT3BQ9UBC3 853 aaKnown RBP11.17□□□□□ -0.62
PCF11-201ENST00000298281 HMGN2P05204 90 aaKnown RBP11.17□□□□□ -0.62
PCF11-201ENST00000298281 PRKACBP22694 351 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 LBX1P52954 281 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 H3F3AP84243 136 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 ZP2Q05996 745 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 GPR18Q14330 331 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 PLA1AQ53H76 456 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 FAM182AQ5T1J6 154 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 OR13C8Q8NGS7 320 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 PHOSPHO2Q8TCD6 241 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 CLSTN3Q9BQT9 956 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 ABHD6Q9BV23 337 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 OR51I2Q9H344 312 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 CSNK1G3Q9Y6M4 447 aa11.17□□□□□ -0.62
PCF11-201ENST00000298281 H3BQ06 376 aaPredicted RBP11.16□□□□□ -0.62
PCF11-201ENST00000298281 ADAM11O75078 769 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 INHBCP55103 352 aa11.16□□□□□ -0.62
PCF11-201ENST00000298281 SRPXP78539 464 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms