RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 PHYHIPQ92561 330 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 THRSPQ92748 146 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 RASD2Q96D21 266 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 KLHDC3Q9BQ90 382 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 NAA11Q9BSU3 229 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-201ENST00000238688 MED18Q9BUE0 208 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 HCAR1Q9BXC0 346 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 OR11A1Q9GZK7 315 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 NAA50Q9GZZ1 169 aaKnown RBP11.82□□□□□ -0.52
SLIRP-201ENST00000238688 LRFN1Q9P244 771 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 NPIPA1Q9UND3 350 aa11.82□□□□□ -0.52
SLIRP-201ENST00000238688 AQP7P3A6NL99 342 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 B4DXG7 233 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 ZNF670-ZNF695F2Z2N8 137 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 ZIC3O60481 467 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 SULT1C4O75897 302 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 HRGP04196 525 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 F13BP05160 661 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 TACSTD2P09758 323 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 ACVR1BP36896 505 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 CDKN2AP42771 156 aaKnown RBP11.81□□□□□ -0.52
SLIRP-201ENST00000238688 HSF1Q00613 529 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 GLO1Q04760 184 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 OR7A5Q15622 319 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 SSX1Q16384 188 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 HYAL4Q2M3T9 481 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 CDONQ4KMG0 1287 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 PDSS1Q5T2R2 415 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 LINC01590Q5TEZ4 76 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 AGAP7PQ5VUJ5 663 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 FCRLBQ6BAA4 426 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 PAMR1Q6UXH9 720 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 IGFN1Q86VF2 1251 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 UEVLDQ8IX04 471 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 SLC35F2Q8IXU6 374 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 ZADH2Q8N4Q0 377 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 DYNC2LI1Q8TCX1 351 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 S100ZQ8WXG8 99 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 ASB10Q8WXI3 467 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 ASB17Q8WXJ9 295 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 ARL5BQ96KC2 179 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 KLHL15Q96M94 604 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 C5orf34Q96MH7 638 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 AGAP4Q96P64 663 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 OXGR1Q96P68 337 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 SF3B5Q9BWJ5 86 aaKnown RBP11.81□□□□□ -0.52
SLIRP-201ENST00000238688 MMP27Q9H306 513 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 MED20Q9H944 212 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 PAQR5Q9NXK6 330 aaPredicted RBP11.81□□□□□ -0.52
SLIRP-201ENST00000238688 TAS2R16Q9NYV7 291 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 KCNG2Q9UJ96 466 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 ZNF346Q9UL40 294 aaKnown RBP11.81□□□□□ -0.52
SLIRP-201ENST00000238688 PCNX1Q96RV3 2341 aa11.81□□□□□ -0.52
SLIRP-201ENST00000238688 TRDV1A0A1B0GX56 115 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 C2orf72A6NCS6 295 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 MS4A18H0YCH9 400 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 KLRC4-KLRK1H3BQV0 150 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 SULT2B1O00204 365 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 PLPP2O43688 288 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 GMFGO60234 142 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 GPRIN2O60269 458 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 TMEM127O75204 238 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 SERPINA3P01011 423 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 IL1AP01583 271 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 ADRA2AP08913 450 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 IMPDH2P12268 514 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 AHCYP23526 432 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 CFL1P23528 166 aaKnown RBP11.8□□□□□ -0.52
SLIRP-201ENST00000238688 TGM4P49221 684 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 AGFG1P52594 562 aaKnown RBP11.8□□□□□ -0.52
SLIRP-201ENST00000238688 H3F3AP84243 136 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 OC90Q02509 493 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-201ENST00000238688 EGR3Q06889 387 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 MFAP5Q13361 173 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 AQP6Q13520 282 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 MS4A18Q3C1V0 323 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 C1QL3Q5VWW1 255 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 HIST2H2BCQ6DN03 193 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 TUBA3EQ6PEY2 450 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 ESPNLQ6ZVH7 1005 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 SLC35D2Q76EJ3 337 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 TRILQ7L0X0 811 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 SHFQ7M4L6 423 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 LHFPL3Q86UP9 236 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 TSPAN10Q9H1Z9 355 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-201ENST00000238688 DCSTAMPQ9H295 470 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 PALMDQ9NP74 551 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 TIGARQ9NQ88 270 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 RPRD1BQ9NQG5 326 aaKnown RBP11.8□□□□□ -0.52
SLIRP-201ENST00000238688 KLHL9Q9P2J3 617 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 KLHL13Q9P2N7 655 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 FREM3P0C091 2139 aa11.8□□□□□ -0.52
SLIRP-201ENST00000238688 SLC22A23A1A5C7 686 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 OR2M5A3KFT3 312 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 C17orf51A8MQB3 221 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 H3BML4 177 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 ARHGEF9O43307 516 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 EFNA2O43921 213 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 NEURL1O76050 574 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 IGHG1P01857 330 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms