RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 C20orf196Q8IYI0 205 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 IQCF1Q8N6M8 205 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 ARIH2OSQ8N7S6 290 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 NOXO1Q8NFA2 376 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 OR2T33Q8NG76 320 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 HDAC2Q92769 488 aaKnown RBP13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 RASD2Q96D21 266 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 MS4A3Q96HJ5 214 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 ALKBH3Q96Q83 286 aaPredicted RBP13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 LINC00470Q9BZP3 86 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 B3GAT2Q9NPZ5 323 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 ASB6Q9NWX5 421 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 USE1Q9NZ43 259 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 MALT1Q9UDY8 824 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 ENOPH1Q9UHY7 261 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 FOXD3Q9UJU5 478 aaPredicted RBP13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 ORC6Q9Y5N6 252 aa13.66□□□□□ -0.22
RPRD1A-208ENST00000589050 NBASA2RRP1 2371 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 ZNF587BE7ETH6 402 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 H7C1C5 153 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 BHLHE40O14503 412 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 ARPC3O15145 178 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 ARHGEF9O43307 516 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 IDH3BO43837 385 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 TXNDC12O95881 172 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 PEX2P28328 305 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 CRISP1P54107 249 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 LCN6P62502 163 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 ESRRGP62508 458 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 GINS1Q14691 196 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 LRRC36Q1X8D7 754 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 PHYHD1Q5SRE7 291 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 SLC35F1Q5T1Q4 408 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 ABHD12BQ7Z5M8 362 aaPredicted RBP13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 GABRG1Q8N1C3 465 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 SYT14Q8NB59 555 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 OR4Q3Q8NH05 313 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 TMEM54Q969K7 222 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 LRRC46Q96FV0 321 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 LRR1Q96L50 414 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 DOCK7Q96N67 2140 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 SLC29A1Q99808 456 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 MRPL13Q9BYD1 178 aaKnown RBP13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 ULBP2Q9BZM5 246 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 RIBC2Q9H4K1 309 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 GALNT8Q9NY28 637 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 ELOVL5Q9NYP7 299 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 GLTPQ9NZD2 209 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 BAIAP2Q9UQB8 552 aa13.65□□□□□ -0.22
RPRD1A-208ENST00000589050 CENPBD1B2RD01 187 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 CASQ2O14958 399 aaPredicted RBP13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 HIST1H1CP16403 213 aaKnown RBP13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 CDH2P19022 906 aaPredicted RBP13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 CD79BP40259 229 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 MYBPC1Q00872 1141 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 ROR2Q01974 943 aaKnown RBP13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 CD47Q08722 323 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 RIPK1Q13546 671 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 P2RY6Q15077 328 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 PGGHGQ32M88 737 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 FBXL19-AS1Q494R0 122 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 C9orf135Q5VTT2 229 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 SLC27A4Q6P1M0 643 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 LINGO2Q7L985 606 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 JAZF1Q86VZ6 243 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 CXorf67Q86X51 503 aaPredicted RBP13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 LNX2Q8N448 690 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 RNASE6Q93091 150 aaKnown RBP13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 KCNK17Q96T54 332 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 ALG12Q9BV10 488 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 GPR35Q9HC97 309 aa13.64□□□□□ -0.23
RPRD1A-208ENST00000589050 RELNP78509 3460 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 ATP6V1G2O95670 118 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 QDPRP09417 244 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 NR2C1P13056 603 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 IGHV1-2P23083 117 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 GRK5P34947 590 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 CDKN2AP42771 156 aaKnown RBP13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 GIPRP48546 466 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 RAD23AP54725 363 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 FOXG1P55316 489 aaPredicted RBP13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 CDK5Q00535 292 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 TFF3Q07654 80 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 FAM27E3Q08E93 113 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 NPRL3Q12980 569 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 ITGADQ13349 1161 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 PTGES3Q15185 160 aaKnown RBP13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 HIST3H3Q16695 136 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 OGFRL1Q5TC84 451 aaPredicted RBP13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 TMEM236Q5W0B7 351 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 LEG1Q6P5S2 330 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 PTCHD4Q6ZW05 846 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 ADCK1Q86TW2 530 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 GALNT4Q8N4A0 578 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 OR52E2Q8NGJ4 325 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 OR4K13Q8NH42 304 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 MCHR2Q969V1 340 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 RBP7Q96R05 134 aa13.63□□□□□ -0.23
RPRD1A-208ENST00000589050 TEX12Q9BXU0 123 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms