RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 NKAIN4Q8IVV8 208 aa11.02□□□□□ -0.65
NPLOC4-213ENST00000573519 OR6X1Q8NH79 312 aa11.02□□□□□ -0.65
NPLOC4-213ENST00000573519 ZNF566Q969W8 418 aa11.02□□□□□ -0.65
NPLOC4-213ENST00000573519 ZNF426Q9BUY5 554 aa11.02□□□□□ -0.65
NPLOC4-213ENST00000573519 MEPEQ9NQ76 525 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-213ENST00000573519 YAE1D1Q9NRH1 226 aa11.02□□□□□ -0.65
NPLOC4-213ENST00000573519 RIMS3Q9UJD0 308 aa11.02□□□□□ -0.65
NPLOC4-213ENST00000573519 AP3M1Q9Y2T2 418 aa11.02□□□□□ -0.65
NPLOC4-213ENST00000573519 USF3Q68DE3 2245 aa11.02□□□□□ -0.65
NPLOC4-213ENST00000573519 IGHV2OR16-5A0A0B4J2B6 119 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 A0A1W2PRG6 482 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 B9A039 149 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 MCIDASD6RGH6 385 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 CXCR6O00574 342 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 GPRIN2O60269 458 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 OR5F1O95221 314 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 RAB36O95755 333 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 ZNF682O95780 498 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 BCL10O95999 233 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 F12P00748 615 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 F13BP05160 661 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 ASAH2BP0C7U1 165 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 NCK1P16333 377 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 FUT1P19526 365 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 THBS4P35443 961 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 YAP1P46937 504 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 CLRN1P58418 232 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 HGFACQ04756 655 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 SNTB2Q13425 540 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 DAG1Q14118 895 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 ANKS4BQ8N8V4 417 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 NUP37Q8NFH4 326 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 OR10H5Q8NGA6 315 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 TMEM239Q8WW34 195 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 LZICQ8WZA0 190 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 TMEM54Q969K7 222 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 SGTBQ96EQ0 304 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 SLC25A44Q96H78 314 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 MS4A3Q96HJ5 214 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 SORCS2Q96PQ0 1159 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 KCTD14Q9BQ13 255 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 POLR2J2Q9GZM3 115 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 POLR2J3Q9H1A7 115 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 NOX3Q9HBY0 568 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 ARL8BQ9NVJ2 186 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 GLTPQ9NZD2 209 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 ADA2Q9NZK5 511 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 ARL2BPQ9Y2Y0 163 aa11.01□□□□□ -0.65
NPLOC4-213ENST00000573519 CADP27708 2225 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 SH3PXD2BA1X283 911 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 hCG_2039718K7EN88 272 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 CD5LO43866 347 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 PDE5AO76074 875 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 OR7A10O76100 309 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 UBL3O95164 117 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 CSF3P09919 207 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 PATE4P0C8F1 98 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 SLC25A16P16260 332 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 NPR2P20594 1047 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 FUT4P22083 530 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 IFNA8P32881 189 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 RBM34P42696 430 aaKnown RBP11□□□□□ -0.65
NPLOC4-213ENST00000573519 GIPRP48546 466 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 RAB1AP62820 205 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 SELENOWP63302 87 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 MYBPC1Q00872 1141 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 RPL18Q07020 188 aaKnown RBP11□□□□□ -0.65
NPLOC4-213ENST00000573519 SVOPLQ8N434 492 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 RNF148Q8N7C7 305 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 IL17RDQ8NFM7 739 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 C10orf105Q8TEF2 133 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 CCT8L2Q96SF2 557 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 PLK3Q9H4B4 646 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 C20orf141Q9NUB4 165 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 B3GNT2Q9NY97 397 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 EGFL7Q9UHF1 273 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 MED31Q9Y3C7 131 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 SNX13Q9Y5W8 968 aa11□□□□□ -0.65
NPLOC4-213ENST00000573519 ALPK2Q86TB3 2170 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 J3KTA2 159 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 DHHO43323 396 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 PIP5K1CO60331 668 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 SERPINA1P01009 418 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 IGHG1P01857 330 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 ERCC1P07992 297 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 QDPRP09417 244 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 PGA4P0DJD7 388 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 PGA3P0DJD8 388 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 AQP2P41181 271 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 PDLIM4P50479 330 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 GALK2Q01415 458 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 ST3GAL3Q11203 375 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 RAB39AQ14964 217 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 EFNB3Q15768 340 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 GKAP1Q5VSY0 366 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 ZNF627Q7L945 461 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 PIWIL3Q7Z3Z3 882 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 SKA3Q8IX90 412 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 SLC22A24Q8N4F4 322 aa10.99□□□□□ -0.65
NPLOC4-213ENST00000573519 SYT14Q8NB59 555 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms