RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 CAV3P56539 151 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 ACTA2P62736 377 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 ACTG2P63267 376 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 RUNX1T1Q06455 604 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 MELKQ14680 651 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 MS4A18Q3C1V0 323 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 EEF1A1P5Q5VTE0 462 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 TIGD4Q8IY51 512 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 OR2T4Q8NH00 348 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 OR6S1Q8NH40 331 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 PGLYRP3Q96LB9 341 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 TXNIPQ9H3M7 391 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 PROK2Q9HC23 129 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 SMURF1Q9HCE7 757 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 ACOXLQ9NUZ1 547 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 PLEKHB1Q9UF11 243 aaPredicted RBP8.47□□□□□ -1.05
LINC00838-201ENST00000562956 ST6GALNAC2Q9UJ37 374 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 GNG8Q9UK08 70 aa8.47□□□□□ -1.05
LINC00838-201ENST00000562956 PRSS37A4D1T9 235 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 PSMD9O00233 223 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 RGS9O75916 674 aaPredicted RBP8.46□□□□□ -1.06
LINC00838-201ENST00000562956 PUDPQ08623 228 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 ZFP69Q49AA0 526 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 DMKNQ6E0U4 476 aaPredicted RBP8.46□□□□□ -1.06
LINC00838-201ENST00000562956 GDPD3Q7L5L3 318 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 WDFY1Q8IWB7 410 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 SYS1Q8N2H4 156 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 TMEM156Q8N614 296 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 OR4K17Q8NGC6 315 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 NEIL3Q8TAT5 605 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 THAP4Q8WY91 577 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 NXPE2Q96DL1 559 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 PPIL3Q9H2H8 161 aaKnown RBP8.46□□□□□ -1.06
LINC00838-201ENST00000562956 WDR76Q9H967 626 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 SH2D2AQ9NP31 389 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 PARD6AQ9NPB6 346 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 ANKRD10Q9NXR5 420 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 KLHDC2Q9Y2U9 406 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 LIPT2A6NK58 231 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 IGHMP01871 453 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 RPS27P42677 84 aaKnown RBP8.46□□□□□ -1.06
LINC00838-201ENST00000562956 TAS2R43P59537 309 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 RPS15P62841 145 aaKnown RBP8.46□□□□□ -1.06
LINC00838-201ENST00000562956 GALK2Q01415 458 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 MYBPHQ13203 477 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 OTPQ5XKR4 325 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 B3GNTL1Q67FW5 361 aaPredicted RBP8.46□□□□□ -1.06
LINC00838-201ENST00000562956 H1FNTQ75WM6 255 aaPredicted RBP8.46□□□□□ -1.06
LINC00838-201ENST00000562956 SLC16A9Q7RTY1 509 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 MDGA2Q7Z553 956 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 ARMC10Q8N2F6 343 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 PARP16Q8N5Y8 322 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 PAQR8Q8TEZ7 354 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 GHSRQ92847 366 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 FOXN4Q96NZ1 517 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 UBL7Q96S82 380 aaPredicted RBP8.46□□□□□ -1.06
LINC00838-201ENST00000562956 ANGPTL4Q9BY76 406 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 HPF1Q9NWY4 346 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 RABL2BQ9UNT1 228 aa8.46□□□□□ -1.06
LINC00838-201ENST00000562956 IQCMA0A1B0GVH7 501 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 SLC35F4A4IF30 521 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 RGS13O14921 159 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 CASKO14936 926 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 RGS5O15539 181 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 NCR1O76036 304 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 AKR7A3O95154 331 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 HPP00738 406 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 PSKH1P11801 424 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 GALP22466 123 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 PSMB10P40306 273 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 OR2B6P58173 313 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 TRIP6Q15654 476 aaKnown RBP8.45□□□□□ -1.06
LINC00838-201ENST00000562956 ZNF684Q5T5D7 378 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 FAM27D1Q5T7N8 215 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 TMEM164Q5U3C3 297 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 TMEM81Q6P7N7 255 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 CCDC190Q86UF4 302 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 PLCZ1Q86YW0 608 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 OR13C5Q8NGS8 318 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 GNRHR2Q96P88 292 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 POTEKPQ9BYX7 375 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 PTGES2Q9H7Z7 377 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 P4HTMQ9NXG6 502 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 CRNNQ9UBG3 495 aaPredicted RBP8.45□□□□□ -1.06
LINC00838-201ENST00000562956 POLHQ9Y253 713 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 PCDHGA1Q9Y5H4 931 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 PCSK5Q92824 1860 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 LOC105371267A0A1B0GV96 52 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 A0A1W2PRG6 482 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 CENPXA8MT69 81 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 ICAM2P13598 275 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 IFNGR1P15260 489 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 SHC1P29353 583 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 TNFSF8P32971 234 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 MAP2K6P52564 334 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 GBX2P52951 348 aaPredicted RBP8.45□□□□□ -1.06
LINC00838-201ENST00000562956 SIRPAP78324 504 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 TLE3Q04726 772 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 ZP4Q12836 540 aa8.45□□□□□ -1.06
LINC00838-201ENST00000562956 MFSD13AQ14CX5 517 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms