RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 CHST8Q9H2A9 424 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 OR52A1Q9UKL2 312 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 TMEM184BQ9Y519 407 aaPredicted RBP11.67□□□□□ -0.54
SYNM-203ENST00000560674 ANKRD12Q6UB98 2062 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 PIPP12273 146 aaPredicted RBP11.67□□□□□ -0.54
SYNM-203ENST00000560674 PCSK6P29122 969 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 GABREP78334 506 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 TMUB2Q71RG4 321 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 OR4A16Q8NH70 328 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 MARC2Q969Z3 335 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 SLC25A46Q96AG3 418 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 NIPSNAP3BQ9BS92 247 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 ABHD6Q9BV23 337 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 PATZ1Q9HBE1 687 aaKnown RBP11.67□□□□□ -0.54
SYNM-203ENST00000560674 DYNLRB1Q9NP97 96 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 GNG12Q9UBI6 72 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 HCSTQ9UBK5 93 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 GFRA2O00451 464 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 SELENOFO60613 162 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 ICAM2P13598 275 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 TEAD1P28347 426 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 GLYR1Q49A26 553 aaPredicted RBP11.67□□□□□ -0.54
SYNM-203ENST00000560674 XKR7Q5GH72 579 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 OR10K2Q6IF99 312 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 ZNF439Q8NDP4 499 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 NANPQ8TBE9 248 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 SLC7A6Q92536 515 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 OR11A1Q9GZK7 315 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 POFUT1Q9H488 388 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 HRASLSQ9HDD0 168 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 EXOSC3Q9NQT5 275 aaKnown RBP11.67□□□□□ -0.54
SYNM-203ENST00000560674 SMCO4Q9NRQ5 59 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 LHX6Q9UPM6 363 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 AIPO00170 330 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 PRAMEF4O60810 478 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 HLA-DOBP13765 273 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 CD46P15529 392 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 PRAMEF20Q5VT98 475 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 PLPP7Q8NBV4 271 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 YIPF5Q969M3 257 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 RASD2Q96D21 266 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 WWTR1Q9GZV5 400 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 PURGQ9UJV8 347 aaKnown RBP11.67□□□□□ -0.54
SYNM-203ENST00000560674 NOSIPQ9Y314 301 aaKnown RBP11.67□□□□□ -0.54
SYNM-203ENST00000560674 TMEM200CA6NKL6 621 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 CXCL12P48061 93 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 FAM78AQ5JUQ0 283 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 ABHD17CQ6PCB6 329 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 FBXO46Q6PJ61 603 aaPredicted RBP11.67□□□□□ -0.54
SYNM-203ENST00000560674 WDR88Q6ZMY6 472 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 BSCL2Q96G97 398 aaPredicted RBP11.67□□□□□ -0.54
SYNM-203ENST00000560674 ELF4Q99607 663 aaPredicted RBP11.67□□□□□ -0.54
SYNM-203ENST00000560674 C1QTNF3Q9BXJ4 246 aa11.67□□□□□ -0.54
SYNM-203ENST00000560674 DDX60Q8IY21 1712 aaKnown RBP11.67□□□□□ -0.54
SYNM-203ENST00000560674 LAMA4Q16363 1823 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 TMEM129A0AVI4 362 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 C20orf202A1L168 122 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 SRP9P49458 86 aaKnown RBP11.66□□□□□ -0.54
SYNM-203ENST00000560674 SSR4P51571 173 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 ISL1P61371 349 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 PMPCAQ10713 525 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 ZNF750Q32MQ0 723 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 DLEU7Q6UYE1 221 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 GRAMD2AQ8IUY3 354 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 UBE2FQ969M7 185 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 NECAP2Q9NVZ3 263 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 CITO14578 2027 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 ICMTO60725 284 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 NPPBP16860 134 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 CHRNB4P30926 498 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 BCL6P41182 706 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 KIAA1024LP59773 190 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 CSNK1G2P78368 415 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 ZNF92Q03936 586 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 HABP2Q14520 560 aaPredicted RBP11.66□□□□□ -0.54
SYNM-203ENST00000560674 HDAC8Q9BY41 377 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 H3BQ06 376 aaPredicted RBP11.66□□□□□ -0.54
SYNM-203ENST00000560674 SIX6O95475 246 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 APEHP13798 732 aaKnown RBP11.66□□□□□ -0.54
SYNM-203ENST00000560674 AADACP22760 399 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 ZNF133P52736 654 aaPredicted RBP11.66□□□□□ -0.54
SYNM-203ENST00000560674 OVCH1Q7RTY7 1134 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 FJX1Q86VR8 437 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 HSD17B11Q8NBQ5 300 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 OR1S2Q8NGQ3 325 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 MITD1Q8WV92 249 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 PRR14Q9BWN1 585 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 ULBP3Q9BZM4 244 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 ANXA7P20073 488 aaKnown RBP11.66□□□□□ -0.54
SYNM-203ENST00000560674 SEMA3BQ13214 749 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 NAA40Q86UY6 237 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 OR11L1Q8NGX0 322 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 OR10R2Q8NGX6 335 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 MUCL1Q96DR8 90 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 ZMAT3Q9HA38 289 aaKnown RBP11.66□□□□□ -0.54
SYNM-203ENST00000560674 MMACHCQ9Y4U1 282 aa11.66□□□□□ -0.54
SYNM-203ENST00000560674 TIMM8AO60220 97 aaPredicted RBP11.65□□□□□ -0.54
SYNM-203ENST00000560674 OLFM2O95897 454 aa11.65□□□□□ -0.54
SYNM-203ENST00000560674 SMIM15Q7Z3B0 74 aa11.65□□□□□ -0.54
SYNM-203ENST00000560674 CADM3Q8N126 398 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 938.3 ms