RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 SPASTQ9UBP0 616 aa0.61□□□□□ -2.31
FOXN3-216ENST00000557496 CENPJQ9HC77 1338 aaPredicted RBP0.61□□□□□ -2.31
FOXN3-216ENST00000557496 AHDC1Q5TGY3 1603 aaPredicted RBP0.6□□□□□ -2.31
FOXN3-216ENST00000557496 KDRP35968 1356 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 CCDC182A6NF36 153 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 MRPS12O15235 138 aaKnown RBP0.6□□□□□ -2.31
FOXN3-216ENST00000557496 UPK3AO75631 287 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 MBD3O95983 291 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 HLA-DPB1P04440 258 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 ZNF806P0C7X5 589 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 NT5EP21589 574 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 WARSP23381 471 aaKnown RBP0.6□□□□□ -2.31
FOXN3-216ENST00000557496 DCKP27707 260 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 P2RY1P47900 373 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 IL1RL1Q01638 556 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 PRKCDQ05655 676 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 OXA1LQ15070 435 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 RABL6Q3YEC7 729 aaPredicted RBP0.6□□□□□ -2.31
FOXN3-216ENST00000557496 CNIH2Q6PI25 160 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 TMED8Q6PL24 325 aaPredicted RBP0.6□□□□□ -2.31
FOXN3-216ENST00000557496 ADM2Q7Z4H4 148 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 OAFQ86UD1 273 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 TMEM105Q8N8V8 129 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 FNDC5Q8NAU1 212 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 APCDD1LQ8NCL9 501 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 OR9A2Q8NGT5 310 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 OR8U1Q8NH10 309 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 LILRB4Q8NHJ6 448 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 SGK3Q96BR1 496 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 SH3YL1Q96HL8 342 aaPredicted RBP0.6□□□□□ -2.31
FOXN3-216ENST00000557496 ZNF681Q96N22 645 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 RNF2Q99496 336 aa0.6□□□□□ -2.31
FOXN3-216ENST00000557496 MRPL37Q9BZE1 423 aaKnown RBP0.6□□□□□ -2.31
FOXN3-216ENST00000557496 DHX35Q9H5Z1 703 aaKnown RBP0.6□□□□□ -2.31
FOXN3-216ENST00000557496 DDX19AQ9NUU7 478 aaKnown RBP0.6□□□□□ -2.31
FOXN3-216ENST00000557496 HELZ2Q9BYK8 2649 aaKnown RBP0.6□□□□□ -2.31
FOXN3-216ENST00000557496 SF3B1O75533 1304 aaKnown RBP eCLIP0.6□□□□□ -2.31
FOXN3-216ENST00000557496 ZNF716A6NP11 495 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 A8MUI8 341 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 F5H6K3 240 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 SPECC1L-ADORA2AF8WAN1 911 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 ZSCAN12O43309 604 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 LANCL1O43813 399 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 NEBLO76041 1014 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 TGFAP01135 160 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 FABP3P05413 133 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 ZNF735P0CB33 412 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 MMP11P24347 488 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 IL12AP29459 219 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 NPBWR2P48146 333 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 CASP4P49662 377 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 SUB1P53999 127 aaKnown RBP eCLIP0.59□□□□□ -2.31
FOXN3-216ENST00000557496 ERVK-25P63136 954 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 KLRC3Q07444 240 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 IFT88Q13099 833 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 GGTA1PQ4G0N0 100 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 AP1ARQ63HQ0 302 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 RAB12Q6IQ22 244 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 TMEM136Q6ZRR5 245 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 ABHD13Q7L211 337 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 CALHM1Q8IU99 346 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 PIANPQ8IYJ0 282 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 OR4K5Q8NGD3 323 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 OR4S2Q8NH73 311 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 FAM110BQ8TC76 370 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 KLF14Q8TD94 323 aaPredicted RBP0.59□□□□□ -2.31
FOXN3-216ENST00000557496 SDR42E1Q8WUS8 393 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 UFD1Q92890 307 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 SLC25A46Q96AG3 418 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 FICDQ9BVA6 458 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 ACAT2Q9BWD1 397 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 OSBPL10Q9BXB5 764 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 TMEM117Q9H0C3 514 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 DPH5Q9H2P9 285 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 MEAF6Q9HAF1 191 aa0.59□□□□□ -2.31
FOXN3-216ENST00000557496 NCAPD2Q15021 1401 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 OXSR1O95747 527 aaPredicted RBP0.58□□□□□ -2.32
FOXN3-216ENST00000557496 ETS1P14921 441 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 IMPDH1P20839 514 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 GCAP28676 217 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 GPR6P46095 362 aaPredicted RBP0.58□□□□□ -2.32
FOXN3-216ENST00000557496 ACADVLP49748 655 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 GZMMP51124 257 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 YBEYP58557 167 aaPredicted RBP0.58□□□□□ -2.32
FOXN3-216ENST00000557496 PDK1Q15118 436 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 PHYHD1Q5SRE7 291 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 RAET1GQ6H3X3 334 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 PLBD1Q6P4A8 553 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 TMEM205Q6UW68 189 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 CASP12Q6UXS9 341 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 UTS2BQ765I0 119 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 VSTM4Q8IW00 320 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 SLC35F2Q8IXU6 374 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 SPANXA2-OT1Q8N9U9 137 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 IPMKQ8NFU5 416 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 OR5D13Q8NGL4 314 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 FLYWCH2Q96CP2 140 aaKnown RBP0.58□□□□□ -2.32
FOXN3-216ENST00000557496 ZNF317Q96PQ6 595 aaPredicted RBP0.58□□□□□ -2.32
FOXN3-216ENST00000557496 EDEM2Q9BV94 578 aa0.58□□□□□ -2.32
FOXN3-216ENST00000557496 RAB34Q9BZG1 259 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms