RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 CENPJQ9HC77 1338 aaPredicted RBP0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 THADAQ6YHU6 1953 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 A0A0U1RQV1 116 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 NPIPA7E9PJI5 369 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 OVOL1O14753 267 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 POLR1CO15160 346 aaPredicted RBP0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 RGS16O15492 202 aaPredicted RBP0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 SSX5O60225 188 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 HLA-DQA1P01909 254 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 CD74P04233 296 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 GNAO1P09471 354 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 ZNF735P0CB33 412 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 NPIPA8P0DM63 369 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 CCDC192P0DO97 292 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 ETS1P14921 441 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 MAP3K8P41279 467 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 CDKN2BP42772 138 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 TDO2P48775 406 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 CASP4P49662 377 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 CCR8P51685 355 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 CRYBB1P53674 252 aaPredicted RBP0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 NUCB2P80303 420 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 IFT88Q13099 833 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 CEBPEQ15744 281 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 KCNIP4Q6PIL6 250 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 CATSPER4Q7RTX7 472 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 CLEC4FQ8N1N0 589 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 SPC24Q8NBT2 197 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 ZNF680Q8NEM1 530 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 IPMKQ8NFU5 416 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 STXBP6Q8NFX7 210 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 OR13G1Q8NGZ3 307 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 ABHD3Q8WU67 409 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 SDR42E1Q8WUS8 393 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 FAM3CQ92520 227 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 FLYWCH2Q96CP2 140 aaKnown RBP0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 SAMD8Q96LT4 415 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 ZNF681Q96N22 645 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 AMDHD1Q96NU7 426 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 SECISBP2Q96T21 854 aaKnown RBP0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 ATP6V0BQ99437 205 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 TMEM117Q9H0C3 514 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 GBA3Q9H227 469 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 ISYNA1Q9NPH2 558 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 RAB23Q9ULC3 237 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 KIAA1257Q9ULG3 409 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 MGAT4BQ9UQ53 548 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 TSPOAP1O95153 1857 aa0.49□□□□□ -2.33
SNORA40.14-201ENST00000516543 KDRP35968 1356 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 MSH6P52701 1360 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 LRP5LA4QPB2 252 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 SPECC1L-ADORA2AF8WAN1 911 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 OR1F1O43749 312 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 YIF1AO95070 293 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 OXSR1O95747 527 aaPredicted RBP0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 HLA-DPB1P04440 258 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 CCDC130P13994 396 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 NT5EP21589 574 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 MMP11P24347 488 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 PSMA2P25787 234 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 DCKP27707 260 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 GCAP28676 217 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 NPBWR2P48146 333 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 IRX3P78415 501 aaPredicted RBP0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 ARG2P78540 354 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 TNFRSF17Q02223 184 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 FAM53BQ14153 422 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 PDK1Q15118 436 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 RAB12Q6IQ22 244 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 MOB3BQ86TA1 216 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 CALHM1Q8IU99 346 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 CCDC65Q8IXS2 484 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 CLDN19Q8N6F1 224 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 OR5D13Q8NGL4 314 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 RIT2Q99578 217 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 ACAT2Q9BWD1 397 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 MRPL13Q9BYD1 178 aaKnown RBP0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 MRPL37Q9BZE1 423 aaKnown RBP0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 RAB17Q9H0T7 212 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 DPH5Q9H2P9 285 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 ZNF639Q9UID6 485 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 MRPS18BQ9Y676 258 aaKnown RBP0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 LTBP2Q14767 1821 aa0.48□□□□□ -2.33
SNORA40.14-201ENST00000516543 FANCIQ9NVI1 1328 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 A0A1W2PNV4 684 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 TCRBV9S1A1TA0A576 114 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 TMEM120BA0PK00 339 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 HIDE1A8MVS5 230 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 BPY2O14599 106 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 ZSCAN12O43309 604 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 KLHL2O95198 593 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 PTBP3O95758 552 aaKnown RBP0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 HLA-DQB1P01920 261 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 ARL14EPLP0DKL9 152 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 WARSP23381 471 aaKnown RBP0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 GPR6P46095 362 aaPredicted RBP0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 RFX3P48380 749 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 GZMMP51124 257 aa0.47□□□□□ -2.33
SNORA40.14-201ENST00000516543 PJVKQ0ZLH3 352 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms