RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MT-ND3P03897 115 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 HLA-DPB1P04440 258 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 RORAP35398 523 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 ATP6V1E1P36543 226 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 RPL13AP40429 203 aaKnown RBP0.73□□□□□ -2.29
CCDC93-209ENST00000488908 TNFSF9P41273 254 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 GPR6P46095 362 aaPredicted RBP0.73□□□□□ -2.29
CCDC93-209ENST00000488908 RABIFP47224 123 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 CSNK1A1P48729 337 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 NCBP2P52298 156 aaKnown RBP eCLIP0.73□□□□□ -2.29
CCDC93-209ENST00000488908 PRRX1P54821 245 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 UGT2B15P54855 530 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 MEF2CQ06413 473 aaPredicted RBP0.73□□□□□ -2.29
CCDC93-209ENST00000488908 TCP10Q12799 353 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 OR5I1Q13606 314 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 INAQ16352 499 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 DPYSL2Q16555 572 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 GGTA1PQ4G0N0 100 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 C1orf220Q5T0J3 134 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 CNIH2Q6PI25 160 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF493Q6ZR52 646 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 TMEM179Q6ZVK1 233 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 CCDC80Q76M96 950 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 CALHM1Q8IU99 346 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF713Q8N859 430 aaPredicted RBP0.73□□□□□ -2.29
CCDC93-209ENST00000488908 OR9A2Q8NGT5 310 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 OR4S2Q8NH73 311 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 PHOSPHO2Q8TCD6 241 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 LKAAEAR1Q8TD35 194 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 PYROXD1Q8WU10 500 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 ABHD3Q8WU67 409 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 SDR42E1Q8WUS8 393 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 LRRC58Q96CX6 371 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 CXorf40BQ96DE9 158 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 SH3GL3Q99963 347 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 KCTD14Q9BQ13 255 aaPredicted RBP0.73□□□□□ -2.29
CCDC93-209ENST00000488908 TEKT3Q9BXF9 490 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 FRMD8P1Q9BZ68 369 aaPredicted RBP0.73□□□□□ -2.29
CCDC93-209ENST00000488908 C1orf21Q9H246 121 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 SYNDIG1Q9H7V2 258 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 YY1AP1Q9H869 796 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 MEAF6Q9HAF1 191 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 C12orf10Q9HB07 376 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 LY9Q9HBG7 655 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 MCCC2Q9HCC0 563 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 DDX19AQ9NUU7 478 aaKnown RBP0.73□□□□□ -2.29
CCDC93-209ENST00000488908 MMP17Q9ULZ9 603 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 KIF3AQ9Y496 699 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 WDR62O43379 1518 aa0.73□□□□□ -2.29
CCDC93-209ENST00000488908 SCN1AP35498 2009 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 CEMIPQ8WUJ3 1361 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 TRAV6A0A075B6T7 132 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 A0A1B0GVI7 797 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 KRT87PA6NCN2 255 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 OR5B21A6NL26 309 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 XPO1O14980 1071 aaKnown RBP0.72□□□□□ -2.29
CCDC93-209ENST00000488908 KMOO15229 486 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF207O43670 478 aaKnown RBP0.72□□□□□ -2.29
CCDC93-209ENST00000488908 ATP5LO75964 103 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 CCNE2O96020 404 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 FABP3P05413 133 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 BCHEP06276 602 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 CAPN1P07384 714 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 LGALS3P17931 250 aaKnown RBP0.72□□□□□ -2.29
CCDC93-209ENST00000488908 AK4P27144 223 aaPredicted RBP0.72□□□□□ -2.29
CCDC93-209ENST00000488908 GNA11P29992 359 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 SOX6P35712 828 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 OPRK1P41145 380 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 GSSP48637 474 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 CAMLGP49069 296 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 CASP4P49662 377 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 RPS21P63220 83 aaKnown RBP0.72□□□□□ -2.29
CCDC93-209ENST00000488908 POU2AF1Q16633 256 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 DUSP7Q16829 419 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 KCTD21Q4G0X4 260 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 AP1ARQ63HQ0 302 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 DUX4L9Q6RFH8 374 aaPredicted RBP0.72□□□□□ -2.29
CCDC93-209ENST00000488908 SPINT4Q6UDR6 99 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 UNQ9165/PRO28630Q6UXU0 137 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 NUDCD3Q8IVD9 361 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 PRSS58Q8IYP2 241 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 STPG2Q8N412 459 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 MIR7-3HGQ8N6C7 128 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 LRRC52Q8N7C0 313 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 NOXO1Q8NFA2 376 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 OR5D13Q8NGL4 314 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 OR4D5Q8NGN0 318 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 OR10T2Q8NGX3 314 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 COQ8AQ8NI60 647 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 UBE2E3Q969T4 207 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 CREB3L1Q96BA8 519 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 SGK3Q96BR1 496 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 TVP23CQ96ET8 276 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 C4orf36Q96KX1 117 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 OXGR1Q96P68 337 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 TMEM237Q96Q45 408 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 TMEM59Q9BXS4 323 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 MRPL37Q9BZE1 423 aaKnown RBP0.72□□□□□ -2.29
CCDC93-209ENST00000488908 KRT23Q9C075 422 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 ELOVL3Q9HB03 270 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms