RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 DRD4P21917 467 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 CBLP22681 906 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 CRATP43155 626 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 CSNK1A1P48729 337 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 DSTNP60981 165 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 TBC1D28Q2M2D7 210 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 PDCD4Q53EL6 469 aaKnown RBP13.67□□□□□ -0.22
DDX56-210ENST00000479440 RPS26P11Q5JNZ5 115 aaPredicted RBP13.67□□□□□ -0.22
DDX56-210ENST00000479440 ZNF771Q7L3S4 317 aaPredicted RBP13.67□□□□□ -0.22
DDX56-210ENST00000479440 PIWIL3Q7Z3Z3 882 aaKnown RBP13.67□□□□□ -0.22
DDX56-210ENST00000479440 SCAIQ8N9R8 606 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 TMEM19Q96HH6 336 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 C1orf147Q96MC9 270 aaPredicted RBP13.67□□□□□ -0.22
DDX56-210ENST00000479440 EPYCQ99645 322 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 MRI1Q9BV20 369 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 BCL2L14Q9BZR8 327 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 THUMPD1Q9NXG2 353 aaKnown RBP13.67□□□□□ -0.22
DDX56-210ENST00000479440 UBAP1Q9NZ09 502 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 ARMCX1Q9P291 453 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 ZNF69Q9UC07 566 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 CACNG2Q9Y698 323 aa13.67□□□□□ -0.22
DDX56-210ENST00000479440 A0A087WUJ7 227 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 A0A0G2JPF8 293 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 HNRNPCL2B2RXH8 293 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 HNRNPCL3B7ZW38 293 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 RFXANKO14593 260 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 HNRNPCL1O60812 293 aaKnown RBP13.66□□□□□ -0.22
DDX56-210ENST00000479440 SPAG7O75391 227 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 FARS2O95363 451 aaKnown RBP13.66□□□□□ -0.22
DDX56-210ENST00000479440 SNAP29O95721 258 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 PTHP01270 115 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 HNRNPCL4P0DMR1 293 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 HLA-DOBP13765 273 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 ETFAP13804 333 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 ZNF81P51508 661 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 HOXC5Q00444 222 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 PUDPQ08623 228 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 TSTQ16762 297 aaKnown RBP13.66□□□□□ -0.22
DDX56-210ENST00000479440 TMEM53Q6P2H8 277 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 KIRREL3Q8IZU9 778 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 MIER2Q8N344 545 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 ZNF781Q8N8C0 355 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 GLB1L3Q8NCI6 653 aaPredicted RBP13.66□□□□□ -0.22
DDX56-210ENST00000479440 ICA1LQ8NDH6 482 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 DEFB108BQ8NET1 73 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 OR6S1Q8NH40 331 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 CCL17Q92583 94 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 SLC41A3Q96GZ6 507 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 OR52E6Q96RD3 313 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 ZBTB18Q99592 522 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 RHOXF2Q9BQY4 288 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 OR51B6Q9H340 312 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 PURGQ9UJV8 347 aaKnown RBP13.66□□□□□ -0.22
DDX56-210ENST00000479440 ZNF281Q9Y2X9 895 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 CHST2Q9Y4C5 530 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 GPR45Q9Y5Y3 372 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 AUP1Q9Y679 476 aa13.66□□□□□ -0.22
DDX56-210ENST00000479440 IGKV1D-42A0A075B6H8 117 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 TLDC2A0PJX2 215 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 HPRP00739 348 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 OR8G3PP0DMU2 310 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 MDKP21741 143 aaPredicted RBP13.65□□□□□ -0.22
DDX56-210ENST00000479440 NME5P56597 212 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 ERVS71-1P61550 626 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 GLO1Q04760 184 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 PMS2P3Q13401 168 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 ALG10BQ5I7T1 473 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 LEG1Q6P5S2 330 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 DPPA2Q7Z7J5 298 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 SLC22A24Q8N4F4 322 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 OR1J2Q8NGS2 313 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 SLC38A5Q8WUX1 472 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 DNAJA4Q8WW22 397 aaPredicted RBP13.65□□□□□ -0.22
DDX56-210ENST00000479440 MS4A7Q9GZW8 240 aaPredicted RBP13.65□□□□□ -0.22
DDX56-210ENST00000479440 LRMDAQ9H2I8 198 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 TCF7L2Q9NQB0 619 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 SELENONQ9NZV5 590 aa13.65□□□□□ -0.22
DDX56-210ENST00000479440 LEF1Q9UJU2 399 aaPredicted RBP13.65□□□□□ -0.22
DDX56-210ENST00000479440 PRKDCP78527 4128 aaKnown RBP13.65□□□□□ -0.22
DDX56-210ENST00000479440 A0A1B0GUS0 222 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 MS4A18H0YCH9 400 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 IGHMP01871 453 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 PATE4P0C8F1 98 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 MAKP20794 623 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 MTNR1AP48039 350 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 NCALDP61601 193 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 UFM1P61960 85 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 ZNF154Q13106 437 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 MS4A18Q3C1V0 323 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 C17orf107Q6ZR85 190 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 NUDCD3Q8IVD9 361 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 SKA3Q8IX90 412 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 PAQR4Q8N4S7 273 aaPredicted RBP13.64□□□□□ -0.23
DDX56-210ENST00000479440 LSMEM1Q8N8F7 131 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 GTF3AQ92664 365 aaKnown RBP13.64□□□□□ -0.23
DDX56-210ENST00000479440 TXNDC15Q96J42 360 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 TEX37Q96LM6 180 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 ZNF48Q96MX3 618 aaPredicted RBP13.64□□□□□ -0.23
DDX56-210ENST00000479440 EGLN1Q9GZT9 426 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 RNF121Q9H920 327 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms